The latest publications from the Department of Organismal Biology

Bimpisidis, Z., Serra, G., König, N., Wallén-Mackenzie, Å. (2023).
Increased sucrose consumption in mice gene-targeted for Vmat2 selectively in NeuroD6-positive neurons of the ventral tegmental area.
Frontiers in Molecular Neuroscience, . 16 DOI
Codjia, J., Sanchez-Ramirez, S., Ebika, S., Wu, G., Margaritescu, S. et al. (2023).
Historical biogeography and diversification of ringless Amanita (section Vaginatae) support an African origin and suggest niche conservatism in the Americas.
Molecular Phylogenetics and Evolution, . 178 DOI
Di Criscio, M., Ekholm Lodahl, J., Stamatakis, A., Kitraki, E., Bakoyiannis, I. et al. (2023).
A human-relevant mixture of endocrine disrupting chemicals induces changes in hippocampal DNA methylation correlating with hyperactive behavior in male mice.
Chemosphere, . 313 DOI
Eriksson, P., Johansson, N., Viberg, H., Buratovic, S., Fredriksson, A. (2023).
Perfluorinated chemicals (PFOA) can, by interacting with highly brominated diphenyl ethers (PBDE 209) during a defined period of neonatal brain development, exacerbate neurobehavioural defects.
Neurotoxicology and Teratology, . 96 DOI
Fallet, M., Blanc, M., Di Criscio, M., Antczak, P., Engwall, M. et al. (2023).
Present and future challenges for the investigation of transgenerational epigenetic inheritance.
Environment International, . 172 DOI
Kakhki, N., Schweizer, M., Lutgen, D., Bowie, R., Shirihai, H. et al. (2023).
A Phylogenomic Assessment of Processes Underpinning Convergent Evolution in Open-Habitat Chats.
Molecular biology and evolution, . 40(1) DOI
Karawita, A., Cheng, Y., Chew, K., Challagulla, A., Kraus, R. et al. (2023).
The swan genome and transcriptome, it is not all black and white.
Genome Biology, . 24(1) DOI
Lidén, M., Mehregan, I. (2023).
Dionysia (Primulaceae): the Cushion Primroses.
Martinossi-Allibert, I., Ament-Velasquez, S., Saupe, S., Johannesson, H. (2023).
To self or not to self?: Absence of mate choice despite costly outcrossing in the fungus Podospora anserina.
Journal of Evolutionary Biology, . 36(1): 238-250 DOI
Rodríguez-Varela, R., Moore, K., Ebenesersdóttir, S., Kilinc, G., Kjellström, A. et al. (2023).
The genetic history of Scandinavia from the Roman Iron Age to the present.
Cell, . 186(1): 32-46.e19 DOI
Simões, L. (2023).
Uncovering the Past through ancient DNA: The Fate and Legacy of the last hunter-gatherers in Western Europe and Northwestern Africa.
Diss. Download fulltext
Abadi, M., Voeten, D., Kulagina, E., Boulvain, F., Da Silva, A. (2022).
A comment on overlooked storm sensitivity of the carbonate factory recorded in the Mississippian Mobarak Formation (Alborz Mountains, Iran).
Geological Journal, . 57(10): 4388-4392 DOI
Abarenkov, K., Kristiansson, E., Ryberg, M., Nogal-Prata, S., Gomez-Martinez, D. et al. (2022).
The curse of the uncultured fungus.
MycoKeys, . 177-194 DOI
Agrillo, Caroline
DNA methylation modifications in human mesenchymal stem cells induced by exposure to endocrine disrupting plasticiser metabolites MBP, MEP, MBzP, MEHP and MINCH.
Student thesis, 2022 Download fulltext
Ahi, E., Brunel, M., Tsakoumis, E., Chen, J., Schmitz, M. (2022).
Appetite regulating genes in zebrafish gut; a gene expression study.
PLOS ONE, . 17(7) DOI
Ahlberg, P., Beznosov, P. (2022).
The Significance of the Devonian Tetrapods of Timan.
Paleontological journal, . 56: 1029-1031 DOI
Ahmerkamp, S., Jalaluddin, F., Cui, Y., Brumley, D., Pacherres, C. et al. (2022).
Simultaneous visualization of flow fields and oxygen concentrations to unravel transport and metabolic processes in biological systems.
CELL REPORTS METHODS, . 2(5) DOI
Al Jewari, C. (2022).
Resolving deep nodes of eukaryote phylogeny.
Diss. Download fulltext
Al Jewari, C., Baldauf, S. (2022).
Conflict over the Eukaryote Root Resides in Strong Outliers, Mosaics and Missing Data Sensitivity of Site-Specific (CAT) Mixture Models.
Systematic Biology Epub ahead of print. DOI
Alva, O., Leroy, A., Heiske, M., Pereda-Loth, V., Tisseyre, L. et al. (2022).
The loss of biodiversity in Madagascar is contemporaneous with major demographic events.
Current Biology, . 32(23): 4997-+ DOI
Ament-Velasquez, S., Vogan, A. (2022).
Podospora anserina.
Trends in Microbiology, . 30(12): 1243-1244 DOI
Ament-Velásquez, S., Vogan, A., Granger-Farbos, A., Bastiaans, E., Martinossi-Allibert, I. et al. (2022).
Allorecognition genes drive reproductive isolation in Podospora anserina.
Nature Ecology & Evolution, . 6(7): 910-923 DOI
Antonelli, A., Smith, R., Perrigo, A., Crottini, A., Hackel, J. et al. (2022).
Madagascar's extraordinary biodiversity: Evolution, distribution, and use.
Science, . 378(6623): 962-+ DOI
Augstein, F. (2022).
Mechanisms of plant root xylem developmental plasticity in response to water deficiency and salt.
Diss. Download fulltext
Augstein, F., Carlsbecker, A. (2022).
Salinity induces discontinuous protoxylem via a DELLA-dependent mechanism promoting salt tolerance in Arabidopsis seedlings.
New Phytologist, . 236(1): 195-209 DOI
Ausmees, K., Sanchez-Quinto, F., Jakobsson, M., Nettelblad, C. (2022).
An empirical evaluation of genotype imputation of ancient DNA.
G3, . 12(6) DOI
Badou, S., Furneaux, B., De Kesel, A., Kalsoom, F., Houdanon, R. et al. (2022).
Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa.
Mycological progress, . 21(1): 243-256 DOI
Barbacka, M., Gorecki, A., Pacyna, G., Pienkowski, G., Philippe, M. et al. (2022).
Early Jurassic coprolites: insights into palaeobotany and the feeding behaviour of dinosaurs.
Papers in Palaeontology, . 8(2) DOI
Baur, P., Kuehl, M., Comba, P., Behrendt, L. (2022).
Possible Functional Roles of Patellamides in the Ascidian-Prochloron Symbiosis.
Marine Drugs, . 20(2) DOI
Bazzi, M., Kear, B., Siversson, M. (2022).
Southern higher-latitude lamniform sharks track mid-Cretaceous environmental change.
, . 103: 362-370 Submitted. DOI
Bhawe, Harshal Kunal
Phylogenomics of Ascetosporea.
Student thesis, 2022 Download fulltext
Bogwald, M., Skar, C., Karlsbakk, E., Alfjorden, A., Feist, S. et al. (2022).
Infection cycle of Marteilia pararefringens in blue mussels Mytilus edulis in a heliothermic marine oyster lagoon in Norway.
Diseases of Aquatic Organisms, . 148: 153-166 DOI
Bohlin, J., Page, C., Lee, Y., Pettersson, J., Jugessur, A. et al. (2022).
Age and sex effects on DNA methylation sites linked to genes implicated in severe COVID-19 and SARS-CoV-2 host cell entry.
PLOS ONE, . 17(6) DOI
Borodin, P., Chen, A., Forstmeier, W., Fouché, S., Malinovskaya, L. et al. (2022).
Mendelian nightmares: the germline-restricted chromosome of songbirds.
Chromosome Research, . 30(2-3): 255-272 DOI
Byrne, H. (2022).
Novel approaches to the environments and ecosystems of the fish-tetrapod transition.
Diss. Download fulltext
Byrne, H., Niedzwiedzki, G., Blom, H., Kear, B., Ahlberg, P. (2022).
Coprolite diversity reveals a cryptic ecosystem in an early Tournaisian lake in East Greenland: Implications for ecosystem recovery after the end-Devonian extinctio.
Palaeogeography, Palaeoclimatology, Palaeoecology, . 605 DOI
Camacho, J., Cabrero, J., Lopez-Leon, M., Martin-Pecina, M., Perfectti, F. et al. (2022).
Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution.
BMC Biology, . 20(1) DOI
Caporale, N., Leemans, M., Birgersson, L., Germain, P., Cheroni, C. et al. (2022).
From cohorts to molecules: Adverse impacts of endocrine disrupting mixtures.
Science, . 375(6582) DOI
Cediel Ulloa, A., Lupu, D., Johansson, Y., Hinojosa, M., Ozel, F. et al. (2022).
Impact of endocrine disrupting chemicals on neurodevelopment: the need for better testing strategies for endocrine disruption-induced developmental neurotoxicity.
EXPERT REVIEW OF ENDOCRINOLOGY & METABOLISM, . 17(2): 131-141 DOI
Cediel Ulloa, A., Yu, X., Hinojosa, M., Johansson, Y., Forsby, A. et al. (2022).
Methylmercury-induced DNA methylation-From epidemiological observations to experimental evidence.
Frontiers in Genetics, . 13 DOI
Cerca, J., Petersen, B., Lazaro-Guevara, J., Rivera-Colon, A., Birkeland, S. et al. (2022).
The genomic basis of the plant island syndrome in Darwin's giant daisies.
Nature Communications, . 13(1) DOI
Clement, A., Challands, T., Cloutier, R., Houle, L., Ahlberg, P. et al. (2022).
Morphometric analysis of lungfish endocasts elucidates early dipnoan palaeoneurological evolution.
eLIFE, . 11 DOI
Codjia, J., Wang, P., Ryberg, M., Yorou, N., Yang, Z. (2022).
Amanita sect. Phalloideae: two interesting non-lethal species from West Africa.
Mycological progress, . 21(3) DOI
Cárdenas, P., Gamage, J., Hettiarachchi, C., Gunasekera, S. (2022).
Good Practices in Sponge Natural Product Studies: Revising Vouchers with Isomalabaricane Triterpenes.
Marine Drugs, . 20(3) DOI
Dauter, U., Alhamdow, A., Cediel-Ulloa, A., Gliga, A., Albin, M. et al. (2022).
Cancer-related changes and low-to-moderate exposure to welding fumes: A longitudinal study.
Scandinavian Journal of Work, Environment and Health, . 48(1): 21-30 DOI
de Lima, L., Ruiz-Ruano, F. (2022).
In-Depth Satellitome Analyses of 37 Drosophila Species Illuminate Repetitive DNA Evolution in the Drosophila Genus.
Genome Biology and Evolution, . 14(5) DOI
De Loma, J., Vicente, M., Tirado, N., Ascui, F., Vahter, M. et al. (2022).
Human adaptation to arsenic in Bolivians living in the Andes.
Chemosphere, . 301 DOI
Di Nicola, M., Coppari, L., Notomista, T., Marini, D. (2022).
Ophidiomyces ophidiicola detection and infection: a global review on a potential threat to the world's snake populations.
European Journal of Wildlife Research, . 68(5) DOI
Duchene, S., Featherstone, L., Freiesleben de Blasio, B., Holmes, E., Bohlin, J. et al. (2022).
Assessment of Coronavirus Disease 2019 Intervention Strategies in the Nordic Countries Using Genomic Epidemiology.
Open Forum Infectious Diseases, . 9(3) DOI
During, M., Smit, J., Voeten, D., Berruyer, C., Tafforeau, P. et al. (2022).
The Mesozoic terminated in boreal spring.
Nature, 603(7899): 91-94 DOI
Edvardsen, R., Wallerman, O., Furmanek, T., Kleppe, L., Jern, P. et al. (2022).
Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut.
PLOS Genetics, . 18(2) DOI
Faye, A., Barnaud, A., Kane, N., Cubry, P., Mariac, C. et al. (2022).
Genomic footprints of selection in early-and late-flowering pearl millet landraces.
Frontiers in Plant Science, . 13 DOI
Ferm, J., Ståhl, B. (2022).
A Revised Subgeneric Classification of the Neotropical Genus Zapoteca (Caesalpinioideae; Fabaceae).
Systematic Botany, . 47(1): 208-214 DOI
Fortes-Lima, C., Triska, P., Cizkova, M., Podgorna, E., Diallo, M. et al. (2022).
Demographic and Selection Histories of Populations Across the Sahel/Savannah Belt.
Molecular biology and evolution, . 39(10) DOI
Fouché, S., Oggenfuss, U., Chanclud, E., Croll, D. (2022).
A devil's bargain with transposable elements in plant pathogens.
Trends in Genetics, . 38(3): 222-230 DOI
Frohlich, M., Sage, R., Craven, L., Schuster, S., Gigot, G. et al. (2022).
Molecular phylogenetics of Euploca (Boraginaceae): homoplasy in many characters, including the C-4 photosynthetic pathway.
Botanical journal of the Linnean Society, . 199(2): 497-537 DOI
Gai, Z., Zhu, M., Ahlberg, P., Donoghue, P. (2022).
The Evolution of the Spiracular Region From Jawless Fishes to Tetrapods.
Frontiers in Ecology and Evolution, . 10 DOI
Garcia-Cunchillos, I., Zamora, J., Ryberg, M., Lado, C. (2022).
Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa).
Molecular Phylogenetics and Evolution, . 177 DOI
Gluck-Thaler, E., Ralston, T., Konkel, Z., Ocampos, C., Ganeshan, V. et al. (2022).
Giant Starship Elements Mobilize Accessory Genes in Fungal Genomes.
Molecular biology and evolution, . 39(5) DOI
Gluck-Thaler, E., Vogan, A., Branco, S. (2022).
Giant mobile elements: Agents of multivariate phenotypic evolution in fungi.
Current Biology, . 32(5): R234-R236 DOI
Goellner, T., Larena, M., Kutanan, W., Lukas, H., Fieder, M. et al. (2022).
Unveiling the Genetic History of the Maniq, a Primary Hunter-Gatherer Society.
Genome Biology and Evolution, . 14(4) DOI
Gohar, D., Poldmaa, K., Tedersoo, L., Aslani, F., Furneaux, B. et al. (2022).
Global diversity and distribution of mushroom-inhabiting bacteria.
Environmental Microbiology Reports, . 14(2): 254-264 DOI
Gopalakrishnan, S., Ebenesersdottir, S., Lundström, I., Turner-Walker, G., Moore, K. et al. (2022).
The population genomic legacy of the second plague pandemic.
Current Biology, . 32(21): 4743-4751.e6 DOI
Goubert, C., Craig, R., Bilat, A., Peona, V., Vogan, A. et al. (2022).
A beginner's guide to manual curation of transposable elements.
Mobile DNA, . 13 DOI
Guillaumin, A., Vlcek, B., Wallén-Mackenzie, Å. (2022).
Improving well-being and survival in the 6-OHDA lesion model of Parkinson's disease in mice: Literature review and step-by-step protocol.
Scandinavian Journal of Laboratory Animal Science, . 48(1): 1-21
Guillaumin, A., Vlcek, B., Wallén-Mackenzie, Å. (2022).
Improving well-being and survival in the 6-OHDA lesion model of Parkinson acute accent s disease in mice: Literature review and step-by-step protocol.
Scandinavian Journal of Laboratory Animal Science, . 48(1): 1-21
Habicher, J., Varshney, G., Waldmann, L., Snitting, D., Allalou, A. et al. (2022).
Chondroitin/dermatan sulfate glycosyltransferase genes are essential for craniofacial development.
PLOS Genetics, . 18(2) DOI
Hallberg, I., Persson, S., Olovsson, M., Moberg, M., Ranefall, P. et al. (2022).
Bovine oocyte exposure to perfluorohexane sulfonate (PFHxS) induces phenotypic, transcriptomic, and DNA methylation changes in resulting embryos in vitro.
Reproductive Toxicology, . 109: 19-30 DOI
Hammarén, R. (2022).
From the migrations of herders and farmers to the colonial era and the modern-day: Genetic inferences on African demographic history.
Diss. Download fulltext
Hernandez-Perez, A., Zamora-Briseno, J., Söderhäll, K., Söderhäll, I. (2022).
Gut microbiome alterations in the crustacean Pacifastacus leniusculus exposed to environmental concentrations of antibiotics and effects on susceptibility to bacteria challenges*.
Developmental and Comparative Immunology, . 126 DOI
Hocke, E., Jamy, M., Burki, F., Clark, C., Stensvold, C. (2022).
Unravelling the Phylogeny of a Common Intestinal Protist: intrageneric Diversity of Endolimax.
Protist, . 173(5) DOI
Hoffman, T., Sjödin, A., Öhrman, C., Karlsson, L., McDonough, R. et al. (2022).
Co-occurrence of Francisella and spotted fever group Rickettsia in avian-associated Hyalomma rufipes.
Microorganisms, . 10(7) DOI
Houdanon, R., Furneaux, B., Yorou, N., Ryberg, M. (2022).
Phylogenetic diversity and affiliation of tropical African ectomycorrhizal fungi.
Mycosphere, . 13(2) Epub ahead of print. DOI
Huang, Z., Furo, I., Liu, J., Peona, V., Gomes, A. et al. (2022).
Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots.
Nature Communications, . 13(1) DOI
Iwanycki Ahlstrand, N., Gopalakrishnan, S., Vieira, F., Bieker, V., Meudt, H. et al. (2022).
Travel Tales of a Worldwide Weed: Genomic Signatures of Plantago major L. Reveal Distinct Genotypic Groups With Links to Colonial Trade Routes.
Frontiers in Plant Science, . 13 DOI
Jamy, M., Biwer, C., Vaulot, D., Obiol, A., Jing, H. et al. (2022).
Global patterns and rates of habitat transitions across the eukaryotic tree of life.
Nature Ecology & Evolution, . 6(10): 1458-1470 DOI
Jensen, E., Diez-del-Molino, D., Gilbert, M., Bertola, L., Borges, F. et al. (2022).
Ancient and historical DNA in conservation policy.
Trends in Ecology & Evolution, . 37(5): 420-429 DOI
Karmin, M., Flores, R., Saag, L., Hudjashov, G., Brucato, N. et al. (2022).
Episodes of Diversification and Isolation in Island Southeast Asian and Near Oceanian Male Lineages.
Molecular biology and evolution, . 39(3) DOI
Kastally, C., Niskanen, A., Perry, A., Kujala, S., Avia, K. et al. (2022).
Taming the massive genome of Scots pine with PiSy50k, a new genotyping array for conifer research.
The Plant Journal, . 109(5): 1337-1350 DOI
Koutsouveli, V., Balgoma, D., Checa, A., Hedeland, M., Riesgo, A. et al. (2022).
Oogenesis and lipid metabolism in the deep-sea sponge Phakellia ventilabrum (Linnaeus, 1767).
Scientific Reports, . 12(1) DOI
Lagercrantz, U., Billhardt, A., Rousku, S., Landberg, K., Thelander, M. et al. (2022).
PIF-independent regulation of growth by an evening complex in the liverwort Marchantia polymorpha.
PLOS ONE, . 17(6) DOI
Leyhr, J., Waldmann, L., Filipek-Górniok, B., Zhang, H., Allalou, A. et al. (2022).
A novel cis-regulatory element drives early expression of Nkx3.2 in the gnathostome primary jaw joint.
eLIFE, 11 DOI
Lindholm, C., Batakis, P., Altimiras, J., Lees, J. (2022).
Intermittent fasting induces chronic changes in the hepatic gene expression of Red Jungle Fowl (Gallus gallus).
BMC Genomics, . 23 DOI
Lizunkova, P., Engdahl, E., Borbely, G., Gennings, C., Lindh, C. et al. (2022).
A Mixture of Endocrine Disrupting Chemicals Associated with Lower Birth Weight in Children Induces Adipogenesis and DNA Methylation Changes in Human Mesenchymal Stem Cells.
International Journal of Molecular Sciences, . 23(4) DOI
Martin, D., Estefa, J., Gil, J. (2022).
Taxonomic review of Gallardoneris nonatoi (Ramos, 1976) comb. nov. (Annelida, Lumbrineridae), and description of a new species of Lumbrineris from the Gulf of Mexico.
ZooKeys, . 35-57 DOI
Martins Borges, Inês
Characterization of the evolution of satellite DNA across Passeriformes.
Student thesis, 2022 Download fulltext
McKenna, J. (2022).
Divergence, admixture and continuity in the human past: Demographic inference using ancient and modern genomes.
Diss. Download fulltext
Mendez Sandin, M., Romac, S., Not, F. (2022).
Intra-genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing.
Environmental Microbiology, . 24(7): 2979-2993 DOI
Meunier, C., Darolti, I., Reimegård, J., Mank, J., Johannesson, H. (2022).
Nuclear-specific gene expression in heterokaryons of the filamentous ascomycete Neurospora tetrasperma.
Proceedings of the Royal Society of London. Biological Sciences, . 289(1980) DOI
Monferrer, N., Biard, T., Mendez Sandin, M., Lombard, F., Picheral, M. et al. (2022).
Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches.
Frontiers in Marine Science, . 9 DOI
Naciri, Y., Toprak, Z., Prentice, H., Hugot, L., Troia, A. et al. (2022).
Convergent Morphological Evolution in Silene Sect. Italicae (Caryophyllaceae) in the Mediterranean Basin.
Frontiers in Plant Science, . 13 DOI
Nguyen, D., Peona, V., Unneberg, P., Suh, A., Jern, P. et al. (2022).
Transposon- and Genome Dynamics in the Fungal Genus Neurospora: Insights from Nearly Gapless Genome Assemblies.
Fungal Genetics Reports, 66(1) DOI
Pacyna, G., Ziaja, J., Barbacka, M., Pienkowski, G., Jarzynka, A. et al. (2022).
Early Jurassic dinosaur-dominated track assemblages, floristic and environmental changes in the Holy Cross Mountains region, Poland.
Geological Quarterly, . 66(3) DOI
Pei, Y., Forstmeier, W., Ruiz-Ruano, F., Mueller, J., Cabrero, J. et al. (2022).
Occasional paternal inheritance of the germline-restricted chromosome in songbirds.
Proceedings of the National Academy of Sciences of the United States of America, . 119(4) DOI
Pereira, M., Vranic, M., Kamble, P., Jernow, H., Kristofi, R. et al. (2022).
CDKN2C expression in adipose tissue is reduced in type II diabetes and central obesity: impact on adipocyte differentiation and lipid storage?.
Translational Research, . 242: 105-121 DOI
Pereira, R. (2022).
In Murky waters: Swedish demosponges and their genealogies.
Diss. Download fulltext
Peyroteo Stjerna, R., Nilsson Stutz, L., Mickleburgh, H., Cardoso, J. (2022).
Mummification in the Mesolithic: New Approaches to Old Photo Documentation Reveal Previously Unknown Mortuary Practices in the Sado Valley, Portugal.
European Journal of Archaeology, . 25(3): 309-330 DOI
Peyroteo Stjerna, R., Simões, L., Fernandes, R., Lopes, G., Günther, T. et al. (2022).
Multidisciplinary investigation reveals an individual of West African origin buried in a Portuguese Mesolithic shell midden four centuries ago.
Journal of Archaeological Science, . 42 DOI
Phillipson, P., Lewis, G., Andriambololonera, S., Rakotoniriana, N., Thulin, M. et al. (2022).
Leguminosae (Fabaceae), legumes.
I Goodman, S. M. et al. (red.) The new natural history of Madagascar . DOI
Ralimanana, H., Perrigo, A., Smith, R., Borrell, J., Faurby, S. et al. (2022).
Madagascar's extraordinary biodiversity: Threats and opportunities.
Science, . 378(6623): 963-+ DOI
Rios, P., Altuna, A., Frutos, I., Manjon-Cabeza, E., Garcia-Guillen, L. et al. (2022).
Aviles Canyon System: Increasing the benthic biodiversity knowledge.
Estuarine, Coastal and Shelf Science, . 274 DOI
Robert, C., Pereira, R., Thollesson, M. (2022).
Addition to Sweden's freshwater sponge fauna and a phylogeographic study of Spongilla lacustris (Spongillida, Porifera) in southern Sweden.
European journal of taxonomy, . 828: 138-167 DOI
Rodrigues Soares, A., Boroffka, N., Schröder, O., Sverchkov, L., Benecke, N. et al. (2022).
Ancient DNA from a 2700-year-old goitered gazelle (Gazella subgutturosa) supports gazelle hunting in Iron Age Central Asia.
Royal Society Open Science, . 9(6) DOI
Rodriguez, E., Pèrtille, F., Guerrero-Bosagna, C., Mitchell, J., Jensen, P. et al. (2022).
Practical application of a Bayesian network approach to poultry epigenetics and stress.
BMC Bioinformatics, . 23(1) DOI
Ruiz-Ruano, F., Navarro-Dominguez, B., Camacho, J., Garrido-Ramos, M. (2022).
Transposable element landscapes illuminate past evolutionary events in the endangered fern Vandenboschia speciosa.
Genome, . 65(2): 95-103 DOI
Ryberg, M., Kalsoom, F., Sanchez-Garcia, M. (2022).
On the evolution of ectomycorrhizal fungi.
Mycosphere, . 13(2) DOI
Rydin, Lotta
Iterative full-genome phasing and imputation using neural networks.
Student thesis, 2022 Download fulltext
Sandell, L., Sharp, N. (2022).
Fitness Effects of Mutations: An Assessment of PROVEAN Predictions Using Mutation Accumulation Data.
Genome Biology and Evolution, . 14(1) DOI
Saupe, S., Johannesson, H. (2022).
On the Mechanistic Basis of Killer Meiotic Drive in Fungi.
Annual Review of Microbiology, . 76: 305-323 DOI
Schlebusch, C. (2022).
Genomics: Testing the limits of de-extinction.
Current Biology, . 32(7): R324-R327 DOI
Schmidt, A., Korall, P., Krings, M., Weststrand, S., Bergschneider, L. et al. (2022).
Selaginella in Cretaceous amber from Myanmar.
Willdenowia, . 52(2): 179-245 DOI
Sheikh, S., Kalsoom, F., Bahram, M., Ryberg, M. (2022).
Impact of model assumptions on the inference of the evolution of ectomycorrhizal symbiosis in fungi.
Scientific Reports, 12(1) DOI
Srigyan, M., Bolivar, H., Urena, I., Santana, J., Petersen, A. et al. (2022).
Bioarchaeological evidence of one of the earliest Islamic burials in the Levant.
Communications Biology, . 5 DOI
Svanholm, S. (2022).
The Xenopus tropicalis model for developmental endocrine and reproductive toxicity: Histological and molecular endpoints for disrupted spermatogenesis.
Diss. Download fulltext
Söderhäll, I., Fasterius, E., Ekblom, C., Söderhäll, K. (2022).
Characterization of hemocytes and hematopoietic cells of a freshwater crayfish based on single-cell transcriptome analysis.
iScience, . 25(8) DOI
Söderhäll, I., Söderhäll, K. (2022).
Blood cell formation in crustaceans..
Fish and Shellfish Immunology, . 131: 1335-1342 DOI
Tang, Q., Burri, R., Liu, Y., Suh, A., Sundev, G. et al. (2022).
Seasonal migration patterns and the maintenance of evolutionary diversity in a cryptic bird radiation.
Molecular Ecology, . 31(2): 632-645 DOI
Temu, S., Clerc, P., Nadel, M., Tibell, L., Tibuhwa, D. et al. (2022).
Molecular, morphological and chemical variation of the Usnea pectinata aggregate from Tanzania, São Tomé and Príncipe.
The Lichenologist, . 54(5): 291-298 DOI
Terrill, D., Jarochowska, E., Henderson, C., Shirley, B., Bremer, O. (2022).
Sr/Ca and Ba/Ca ratios support trophic partitioning within a Silurian conodont community from Gotland, Sweden.
Paleobiology, . 48(4): 601-621 DOI
Thulin, M. (2022).
The names of Dipterygium glaucum and Rorida cornus-africani in Cleome (Cleomaceae), and on the identity of Forsskal & apos;s Bunias orientalis.
Nordic Journal of Botany, . 2022(8) DOI
Thulin, M. (2022).
Vincetoxicum arabicum (Apocynaceae-Asclepiadoideae), a new combination for a species in Arabia and Africa, and notes on Rhinolobium.
Nordic Journal of Botany, . 2022(10) DOI
Thulin, M. (2022).
Fynd av hårnarv på Gotland väcker namnfrågor.
Svensk Botanisk Tidskrift, 116(1): 44-51
Thulin, M., Al‐Hawshabi, O. (2022).
The identity of Caralluma dolichocarpa (Apocynaceae–Asclepiadoideae) and a combination in Ceropegia for Echidnopsis globosa.
Nordic Journal of Botany, . 2022(12) DOI
Tikhonenkov, D., Jamy, M., Borodina, A., Belyaev, A., Zagumyonnyi, D. et al. (2022).
On the origin of TSAR: morphology, diversity and phylogeny of Telonemia.
Open Biology, . 12(3) DOI
Trinajstic, K., Long, J., Sanchez, S., Boisvert, C., Snitting, D. et al. (2022).
Exceptional preservation of organs in Devonian placoderms from the Gogo lagerstätte.
Science, . 377(6612): 1311-1314 DOI
Tsakoumis, E., Ahi, E., Schmitz, M. (2022).
Impaired leptin signaling causes subfertility in female zebrafish.
, . 546 DOI
Utsunomia, R., Vaio, M., Ruiz-Ruano, F. (2022).
Editorial: Cytogenomics: Structural Organization and Evolution of Genomes.
Frontiers in Genetics, . 13 DOI
Valeriani, G., Vukovic, I., Bersani, F., Diman, A., Ghorbani, A. et al. (2022).
Tackling Ethnic Health Disparities Through Community Health Worker Programs: A Scoping Review on Their Utilization During the COVID-19 Outbreak.
Population health management, . 25(4): 517-526 DOI
Vaulot, D., Sim, C., Ong, D., Teo, B., Biwer, C. et al. (2022).
metaPR(2): A database of eukaryotic 18S rRNA metabarcodes with an emphasis on protists.
Molecular Ecology Resources, . 22(8): 3188-3201 DOI
Vogan, A., Martinossi-Allibert, I., Ament-Velasquez, S., Svedberg, J., Johannesson, H. (2022).
The spore killers, fungal meiotic driver elements.
Mycologia, . 114(1): 1-23 DOI
Vogan, A., Svedberg, J., Grudzinska‐Sterno, M., Johannesson, H. (2022).
Meiotic drive is associated with sexual incompatibility in Neurospora.
Evolution, . 76(11): 2687-2696 DOI
Waldmann, L., Leyhr, J., Zhang, H., Allalou, A., Öhman, C. et al. (2022).
The Role of Gdf5 in the Development of the Zebrafish Fin Endoskeleton.
Developmental Dynamics, . 251(9): 1535-1549 DOI
Walter, T., Ghorbani, A., van Andel, T. (2022).
The emperor's herbarium: The German physician Leonhard Rauwolf (1535?-96) and his botanical field studies in the Middle East.
History of Science, . 60(1): 130-151 DOI
Xiao, L., Antczak, P., Rüegg, J., Behrendt, L. (2022).
Zeitotox: Toxicology and the Rhythms of Life.
Environmental Science and Technology, . 56(16): 11100-11102 DOI
Xiao, L., Johansson, S., Rughöft, S., Burki, F., Mendez Sandin, M. et al. (2022).
Photophysiological response of Symbiodiniaceae single cells to temperature stress.
The ISME Journal, . 16(8): 2060-2064 DOI
Zhu, Y., Li, Q., Lu, J., Chen, Y., Wang, J. et al. (2022).
The oldest complete jawed vertebrates from the early Silurian of China.
Nature, . 609(7929): 954-958 DOI
Agostinelli, M., Nguyen, D., Witzell, J., Cleary, M. (2021).
Mycobiome of Fraxinus excelsior With Different Phenotypic Susceptibility to Ash Dieback.
Frontiers in Forests and Global Change, 4 DOI
Ahi, E., Tsakoumis, E., Brunel, M., Schmitz, M. (2021).
Transcriptional study reveals a potential leptin-dependent gene regulatory network in zebrafish brain.
Fish Physiology & Biochemistry, . 47(4): 1283-1298 DOI
Ahlberg, P. (2021).
A comparative genomic framework for the fish-tetrapod transition.
Science China Life Sciences, . 64(4): 664-666 DOI
Aignon, H., Jabeen, S., Naseer, A., Yorou, N., Ryberg, M. (2021).
Three new species of Inosperma (Agaricales, Inocybaceae) from Tropical Africa.
MycoKeys, . 97-116 DOI
Aignon, H., Naseer, A., Matheny, B., Yorou, N., Ryberg, M. (2021).
Mallocybe africana (Inocybaceae, Fungi), the first species of Mallocybe described from Africa.
Phytotaxa, . 478(1): 49-60 DOI
Alcolombri, U., Peaudecerf, F., Fernandez, V., Behrendt, L., Lee, K. et al. (2021).
Sinking enhances the degradation of organic particles by marine bacteria.
Nature Geoscience, . 14(10): 775-780 DOI
Alfsnes, K., Eldholm, V., Gaunt, M., de Lamballerie, X., Gould, E. et al. (2021).
Tracing and tracking the emergence, epidemiology and dispersal of dengue virus to Africa during the 20th century.
One Health, . 13 DOI
Ament-Velásquez, S., Tuovinen, V., Bergström, L., Spribille, T., Vanderpool, D. et al. (2021).
The plot thickens: haploid and triploid-like thalli, hybridization, and biased mating type ratios in Letharia.
Frontiers in Fungal Biology, 2 DOI
Andersson, M., Johansson, S., Bergman, H., Xiao, L., Behrendt, L. et al. (2021).
A microscopy-compatible temperature regulation system for single-cell phenotype analysis - demonstrated by thermoresponse mapping of microalgae.
Lab on a Chip, . 21(9): 1694-1705 DOI
Aparicio, H., Hedberg, I., Bandeira, S., Ghorbani, A. (2021).
Ethnobotanical study of medicinal and edible plants used in Nhamacoa area, Manica province-Mozambique.
South African Journal of Botany, 139: 318-328 DOI
Awoga, Roseline Ayowumi
Optimization of an In-Vitro System for Testing Developmental Neurotoxicity Induced by Oestrogen, Androgen and Thyroid Disruption.
Student thesis, 2021 Download fulltext
Bagchi, B., Corbel, Q., Khan, I., Payne, E., Banerji, D. et al. (2021).
Sexual conflict drives micro- and macroevolution of sexual dimorphism in immunity.
BMC Biology, 19(1) DOI
Ballesteros, A., Östman, C., Santin, A., Marambio, M., Narda, M. et al. (2021).
Cnidome and Morphological Features of Pelagia noctiluca (Cnidaria: Scyphozoa) Throughout the Different Life Cycle Stages.
Frontiers in Marine Science, . 8 DOI
Bazzi, M. (2021).
100 million years of shark macroevolution: A morphometric dive into tooth shape diversity.
Diss. Download fulltext
Bazzi, M., Campione, N., Ahlberg, P., Blom, H., Kear, B. (2021).
Tooth morphology elucidates shark evolution across the end-Cretaceous mass extinction.
PLoS biology, . 19(8) DOI
Bazzi, M., Campione, N., Kear, B., Pimiento, C., Ahlberg, P. (2021).
Feeding ecology has shaped the evolution of modern sharks.
Current Biology, 31(23): 5138-5148.e4 DOI
Berdan, E., Blanckaert, A., Slotte, T., Suh, A., Westram, A. et al. (2021).
Unboxing mutations: Connecting mutation types with evolutionary consequences.
Molecular Ecology, . 30(12): 2710-2723 DOI
Bergero, R., Ellis, P., Haerty, W., Larcombe, L., Macaulay, I. et al. (2021).
Meiosis and beyond - understanding the mechanistic and evolutionary processes shaping the germline genome.
Biological Reviews, . 96(3): 822-841 DOI
Bernhardsson, C., Zan, Y., Chen, Z., Ingvarsson, P., Wu, H. (2021).
Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce (Picea abies L. Karst) by whole genome resequencing and its transferability to other spruce species.
Molecular Ecology Resources, . 21(3): 880-896 DOI
Blanc, M., Antczak, P., Cousin, X., Grunau, C., Scherbak, N. et al. (2021).
The insecticide permethrin induces transgenerational behavioral changes linked to transcriptomic and epigenetic alterations in zebrafish (Danio rerio).
Science of the Total Environment, . 779 DOI
Blank, M., Sjogren, K., Knipper, C., Frei, K., Malmström, H. et al. (2021).
Mobility patterns in inland southwestern Sweden during the Neolithic and Early Bronze Age.
Archaeological and Anthropological Sciences, . 13(4) DOI
Borinder, N., Poropat, S., Campione, N., Wigren, T., Kear, B. (2021).
Postcranial osteology of the basally branching hadrosauroid dinosaur Tanius sinensis from the Upper Cretaceous Wangshi Group of Shandong, China.
Journal of Vertebrate Paleontology, . 41(1) DOI
Bornehag, C., Engdahl, E., Hallerback, M., Wikström, S., Lindh, C. et al. (2021).
Prenatal exposure to bisphenols and cognitive function in children at 7 years of age in the Swedish SELMA study.
Environment International, 150 DOI
Bremer, O., Qu, Q., Sanchez, S., Märss, T., Fernandez, V. et al. (2021).
The emergence of a complex pore-canal system in the dermal skeleton of Tremataspis (Osteostraci).
Journal of morphology, 282(8): 1141-1157 DOI
Breton, G., Johansson, A., Sjödin, P., Schlebusch, C., Jakobsson, M. (2021).
Comparison of sequencing data processing pipelines and application to underrepresented African human populations.
BMC Bioinformatics, . 22(1) DOI
Burki, F., Sandin, M., Jamy, M. (2021).
Diversity and ecology of protists revealed by metabarcoding.
Current Biology, . 31(19): R1267-R1280 DOI
Calabon, M., Jones, E., Hyde, K., Boonmee, S., Tibell, S. et al. (2021).
Phylogenetic assessment and taxonomic revision of Halobyssothecium and Lentithecium (Lentitheciaceae, Pleosporales).
Mycological progress, . 20(5): 701-720 DOI
Capador‐Barreto, H., Bernhardsson, C., Milesi, P., Vos, I., Lundén, K. et al. (2021).
Killing two enemies with one stone?: Genomics of resistance to two sympatric pathogens in Norway spruce.
Molecular Ecology, . 30(18): 4433-4447 DOI
Carlsbecker, A., Augstein, F. (2021).
Xylem versus phloem in secondary growth: a balancing act mediated by gibberellins.
Journal of Experimental Botany, 72(10): 3489-3492 DOI
Carrara, F., Sengupta, A., Behrendt, L., Vardi, A., Stocker, R. (2021).
Bistability in oxidative stress response determines the migration behavior of phytoplankton in turbulence.
Proceedings of the National Academy of Sciences of the United States of America, 118(5) DOI
Castiello, M., Jerve, A., Burton, M., Friedman, M., Brazeau, M. (2021).
Endocranial morphology of the petalichthyid placoderm Ellopetalichthys scheii from the Middle Devonian of Arctic Canada, with remarks on the inner ear and neck joint morphology of placoderms.
Canadian journal of earth sciences (Print), . 58(1): 93-104 DOI
Cediel Ulloa, A., Gliga, A., Love, T., Pineda, D., Mruzek, D. et al. (2021).
Prenatal methylmercury exposure and DNA methylation in seven-year-old children in the Seychelles Child Development Study.
Environment International, 147 DOI
Cediel Ulloa, A., Isaxon, C., Eriksson, A., Primetzhofer, D., Sortica, M. et al. (2021).
Toxicity of stainless and mild steel particles generated from gas-metal arc welding in primary human small airway epithelial cells.
Scientific Reports, . 11(1) DOI
Cerenius, L., Söderhäll, K. (2021).
Immune properties of invertebrate phenoloxidases.
Developmental and Comparative Immunology, . 122 DOI
Chen, J., Bi, H., Pettersson, M., Sato, D., Fuentes Pardo, A. et al. (2021).
Functional differences between TSHR alleles associate with variation in spawning season in Atlantic herring.
Communications Biology, . 4(1) DOI
Choin, J., Mendoza-Revilla, J., Arauna, L., Cuadros-Espinoza, S., Cassar, O. et al. (2021).
Genomic insights into population history and biological adaptation in Oceania.
Nature, . 592(7855): 583-589 DOI
Choudhury, A., Sengupta, D., Ramsay, M., Schlebusch, C. (2021).
Bantu-speaker migration and admixture in southern Africa.
Human Molecular Genetics, . 30(R1): R56-R63 DOI
Christmas, M., Jones, J., Olsson, A., Wallerman, O., Bunikis, I. et al. (2021).
Genetic Barriers to Historical Gene Flow between Cryptic Species of Alpine Bumblebees Revealed by Comparative Population Genomics.
Molecular biology and evolution, . 38(8): 3126-3143 DOI
Coutinho, A., Malmström, H., Edlund, H., Henshilwood, C., van Niekerk, K. et al. (2021).
Later Stone Age human hair from Vaalkrans Shelter, Cape Floristic Region of South Africa, reveals genetic affinity to Khoe groups.
American Journal of Physical Anthropology, 174(4): 701-713 DOI
Davesne, D., Friedman, M., Schmitt, A., Fernandez, V., Carnevale, G. et al. (2021).
Fossilized cell structures identify an ancient origin for the teleost whole-genome duplication.
Proceedings of the National Academy of Sciences of the United States of America, . 118(30) DOI
Debortoli, G., de Araujo, G., Fortes-Lima, C., Parra, E., Suarez-Kurtz, G. (2021).
Identification of ancestry proportions in admixed groups across the Americas using clinical pharmacogenomic SNP panels.
Scientific Reports, . 11(1) DOI
Delp, J., Cediel Ulloa, A., Suciu, I., Kranaster, P., van Vugt-Lussenburg, B. et al. (2021).
Neurotoxicity and underlying cellular changes of 21 mitochondrial respiratory chain inhibitors.
Archives of Toxicology, . 95(2): 591-615 DOI
Diniz, M., Arias Cabal, P., Araújo, A., Peyroteo Stjerna, R. (2021).
Debating Neolithization from a Mesolithic point of view: The Sado Valley (Portugal) experience.
I Dušan Borić, Dragana Antonović, Bojana Mihailović (red.) Foraging Assemblages, . 713-719
Domínguez-Andrés, J., Kuijpers, Y., Bakker, O., Jaeger, M., Xu, C. et al. (2021).
Evolution of cytokine production capacity in ancient and modern European populations.
eLIFE, 10 DOI
dos Santos, R., Calegari, R., de Andrade Silva, D., Ruiz-Ruano, F., Melo, S. et al. (2021).
A Long-Term Conserved Satellite DNA That Remains Unexpanded in Several Genomes of Characiformes Fish Is Actively Transcribed.
Genome Biology and Evolution, . 13(2) DOI
Dupret, V., Szaniawski, H., Dec, M., Szrek, P. (2021).
New cranial material of the acanthothoracid placoderm Palaeacanthaspis vasta from the Lower Devonian of Podolia-phylogenetic and taxonomic significance.
Acta Palaeontologica Polonica, . 66(2): 337-347 DOI
Dussex, N., Bergfeldt, N., Prado, V., Dehasque, M., Diez-del-Molino, D. et al. (2021).
Integrating multi-taxon palaeogenomes and sedimentary ancient DNA to study past ecosystem dynamics.
Proceedings of the Royal Society of London. Biological Sciences, . 288(1957) DOI
Ekblom, C., Söderhäll, K., Söderhäll, I. (2021).
Early Changes in Crayfish Hemocyte Proteins after Injection with a beta-1,3-glucan, Compared to Saline Injected and Naive Animals.
International Journal of Molecular Sciences, . 22(12) DOI
Ekholm Lodahl, Jennifer
Analysis of epigenetic changes induced by exposure to a mixture of endocrine disrupting chemicals in the mouse brain and a hippocampus mouse cell model.
Student thesis, 2021 Download fulltext
Elliott, T., Heitkam, T., Hubley, R., Quesneville, H., Suh, A. et al. (2021).
TE Hub: A community-oriented space for sharing and connecting tools, data, resources, and methods for transposable element annotation.
Mobile DNA, 12(1) DOI
Elmhalli, F., Garboui, S., Karlson, A., Mozuraitis, R., Baldauf, S. et al. (2021).
Acaricidal activity against Ixodes ricinus nymphs of essential oils from the Libyan plants Artemisia herba alba, Origanum majorana and Juniperus phoenicea.
Veterinary Parasitology, . 24 DOI
Engdahl, E., Alavian-Ghavanini, A., Forsell, Y., Lavebratt, C., Rüegg, J. (2021).
Childhood adversity increases methylation in the GRIN2B gene.
Journal of Psychiatric Research, 132: 38-43 DOI
Engdahl, E., Svensson, K., Lin, P., Alavian-Ghavanini, A., Lindh, C. et al. (2021).
DNA methylation at GRIN2B partially mediates the association between prenatal bisphenol F exposure and cognitive functions in 7-year-old children in the SELMA study.
Environment International, . 156 DOI
Engdahl, E., van Schijndel, M., Voulgaris, D., Di Criscio, M., Ramsbottom, K. et al. (2021).
Bisphenol A Inhibits the Transporter Function of the Blood-Brain Barrier by Directly Interacting with the ABC Transporter Breast Cancer Resistance Protein (BCRP).
International Journal of Molecular Sciences, 22(11) DOI
Fahlman, A., Lindsjo, J., Bergvall, U., Agren, E., Arvén Norling, T. et al. (2021).
Measurement of catestatin and vasostatin in wild boar Sus scrofa captured in a corral trap.
BMC Research Notes, . 14(1) DOI
Feron, R., Pan, Q., Wen, M., Imarazene, B., Jouanno, E. et al. (2021).
RADSex: A computational workflow to study sex determination using restriction site-associated DNA sequencing data.
Molecular Ecology Resources, . 21(5): 1715-1731 DOI
Fortes-Lima, C., Laurent, R., Thouzeau, V., Toupance, B., Verdu, P. (2021).
Complex genetic admixture histories reconstructed with Approximate Bayesian Computation.
Molecular Ecology Resources, . 21(4): 1098-1117 DOI
Fortes-Lima, C., Schlebusch, C. (2021).
Closing the Gaps in Genomic Research.
Trends in Genetics, 37(2): 104-106 DOI
Fortes-Lima, C., Verdu, P. (2021).
Anthropological genetics perspectives on the transatlantic slave trade.
Human Molecular Genetics, 30(R1): R79-R87 DOI
Furneaux, B., Bahram, M., Rosling, A., Yorou, N., Ryberg, M. (2021).
Long- and short-read metabarcoding technologies reveal similar spatiotemporal structures in fungal communities.
Molecular Ecology Resources, . 21(6): 1833-1849 DOI
Galbraith, J., Kortschak, R., Suh, A., Adelson, D. (2021).
Genome Stability Is in the Eye of the Beholder: CR1 Retrotransposon Activity Varies Significantly across Avian Diversity.
Genome Biology and Evolution, . 13(12) DOI
Galbraith, J., Ludington, A., Sanders, K., Suh, A., Adelson, D. (2021).
Horizontal transfer and subsequent explosive expansion of a DNA transposon in sea kraits (Laticauda).
Biology Letters, . 17(9) DOI
Gholami, S., Vafaee, Y., Nazari, F., Ghorbani, A. (2021).
Exploring genetic variations in threatened medicinal orchids using start codon targeted (SCoT) polymorphism and marker-association with seed morphometric traits.
Physiology and Molecular Biology of Plants, . 27(4): 769-785 DOI
Gholami, S., Vafaee, Y., Nazari, F., Ghorbani, A. (2021).
Molecular characterization of endangered Iranian terrestrial orchids using ISSR markers and association with floral and tuber-related phenotypic traits.
PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, . 27(1): 53-68 DOI
Gokulendran Nair, Akshay
The Enthralling Case of Root Xylem Developmental Plasticity in Arabidopsis thaliana Accessions upon ABA stress.
Student thesis, 2021 Download fulltext
Gorniok, B., Habicher, J., Ledin, J., Kjellén, L. (2021).
Heparan Sulfate Biosynthesis in Zebrafish.
Journal of Histochemistry and Cytochemistry, . 69(1): 49-60 DOI
Guillaumin, A., Serra, G., Georges, F., Wallén-Mackenzie, Å. (2021).
Experimental investigation into the role of the subthalamic nucleus (STN) in motor control using optogenetics in mice.
Brain Research, . 1755 DOI
Hallberg, I., Persson, S., Olovsson, M., Sirard, M., Damdimopoulou, P. et al. (2021).
Perfluorooctane sulfonate (PFOS) exposure of bovine oocytes affects early embryonic development at human-relevant levels in an in vitro model.
Toxicology, . 464 DOI
Hartmann, F., Ament-Velásquez, S., Vogan, A., Gautier, V., Le Prieur, S. et al. (2021).
Size Variation of the Nonrecombining Region on the Mating-Type Chromosomes in the Fungal Podospora anserina Species Complex.
Molecular biology and evolution, . 38(6): 2475-2492 DOI
Hedren, M., Birkedal, S., de Boer, H., Ghorbani, A., Gravendeel, B. et al. (2021).
Asymmetric contributions of seed and pollen to gene dispersal in the marsh orchid Dactylorhiza umbrosa in Asia Minor.
Molecular Ecology, . 30(8): 1791-1805 DOI
Hernández-Pérez, A., Söderhäll, K., Sirikharin, R., Jiravanichpaisal, P., Söderhäll, I. (2021).
Vibrio areninigrae as a pathogenic bacterium in a crustacean.
Journal of Invertebrate Pathology, 178 DOI
Hiltunen, M. (2021).
Full circle: Rise and fate of genetic variation in Marasmius oreades fairy rings.
Diss. Download fulltext
Hiltunen, M., Ament-Velásquez, S., Johannesson, H. (2021).
The assembled and annotated genome of the fairy-ring fungus Marasmius oreades.
Genome Biology and Evolution, . 13(7) DOI
Hiltunen, M., Ryberg, M., Johannesson, H. (2021).
ARBitR: an overlap-aware genome assembly scaffolder for linked reads.
Bioinformatics, 37(15): 2203-2205 DOI
Hoffman, T., Carra, L., Öhagen, P., Fransson, T., Barboutis, C. et al. (2021).
Association between guilds of birds in the African-Western Palaearctic region and the tick species Hyalomma rufipes, one of the main vectors of Crimean-Congo hemorrhagic fever virus.
One Health, . 13 DOI
Hollfelder, N., Babiker, H., Granehäll, L., Schlebusch, C., Jakobsson, M. (2021).
The Genetic Variation of Lactase Persistence Alleles in Sudan and South Sudan.
Genome Biology and Evolution, 13(5) DOI
Hollfelder, N., Breton, G., Sjödin, P., Jakobsson, M. (2021).
The deep population history in Africa.
Human Molecular Genetics, . 30(R1): R2-R10 DOI
Irisarri, I., Darienko, T., Pröschold, T., Fürst-Jansen, J., Jamy, M. et al. (2021).
Unexpected cryptic species among streptophyte algae most distant to land plants.
Proceedings of the Royal Society of London. Biological Sciences, . 288(1963) DOI
Irisarri, I., Strassert, J., Burki, F. (2021).
Phylogenomic Insights into the Origin of Primary Plastids.
Systematic Biology, . 71(1): 105-120 DOI
Jaenson, T., Wilhelmsson, P. (2021).
First Record of a Suspected Human-Pathogenic Borrelia Species in Populations of the Bat Tick Carios vespertilionis in Sweden.
Microorganisms, 9(5) DOI
Jamy, M. (2021).
Environmental sequencing to infer patterns of eukaryotic evolution: Combining long-read and short-read metabarcoding.
Diss. Download fulltext
Jarochowska, E., Bremer, O., Yiu, A., Märss, T., Blom, H. et al. (2021).
Revision of thelodonts, acanthodians, conodonts, and the depositional environments in the Burgen outlier (Ludlow, Silurian) of Gotland, Sweden.
GFF, . 143(2-3): 168-189 DOI
Jia, P., Du, X., Chen, R., Zhou, J., Agostini, M. et al. (2021).
The Combination of 2D Layered Graphene Oxide and 3D Porous Cellulose Heterogeneous Membranes for Nanofluidic Osmotic Power Generation.
Molecules, . 26(17) DOI
Johansson, S., Xiao, L., Andersson, M., Bergman, H., Behrendt, L. et al. (2021).
Mapping the thermoresponses of micralgae by integrating single-cell arrays on a programmable temperature stage.
I 25th International Conference on Miniaturised Systems for Chemistry and Life Sciences (µTAS 2021), Hybrid event hosted in Palm Springs, USA, October 10-14 2021
Juras, A., Ehler, E., Chylenski, M., Pospieszny, L., Spinek, A. et al. (2021).
Maternal genetic origin of the late and final Neolithic human populations from present-day Poland.
American Journal of Physical Anthropology, . 176(2): 223-236 DOI
Karlsson, O., Svanholm, S., Eriksson, A., Chidiac, J., Eriksson, J. et al. (2021).
Pesticide-induced multigenerational effects on amphibian reproduction and metabolism.
Science of the Total Environment, . 775 DOI
Kilinc, G., Kashuba, N., Koptekin, D., Bergfeldt, N., Dönertas, H. et al. (2021).
Human population dynamics and Yersinia pestis in ancient northeast Asia.
Science Advances, . 7(2) DOI
Kirscher, U., El Atfy, H., Gaertner, A., Dallanave, E., Munz, P. et al. (2021).
Age constraints for the Trachilos footprints from Crete.
Scientific Reports, . 11(1) DOI
Lagercrantz, U., Billhardt, A., Rousku, S., Leso, M., Reza, S. et al. (2021).
DE‐ETIOLATED1 has a role in the circadian clock of the liverwort Marchantia polymorpha.
New Phytologist, 232(2): 595-609 DOI
Lankheet, I., Vicente, M., Barbieri, C., Schlebusch, C. (2021).
The performance of common SNP arrays in assigning African mitochondrial haplogroups.
BMC GENOMIC DATA, . 22(1) DOI
Larena, M., McKenna, J., Sanchez-Quinto, F., Bernhardsson, C., Ebeo, C. et al. (2021).
Philippine Ayta possess the highest level of Denisovan ancestry in the world.
Current Biology, . 31(19): 4219-4230 DOI
Larena, M., Sanchez-Quinto, F., Sjödin, P., McKenna, J., Ebeo, C. et al. (2021).
Multiple migrations to the Philippines during the last 50,000 years.
Proceedings of the National Academy of Sciences of the United States of America, . 118(13) DOI
Lee, K., Pereira, F., Palatinszky, M., Behrendt, L., Alcolombri, U. et al. (2021).
Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions.
Nature Protocols, . 16(2) DOI
Leigh, D., Lischer, H., Guillaume, F., Grossen, C., Günther, T. (2021).
Disentangling adaptation from drift in bottlenecked and reintroduced populations of Alpine ibex.
Molecular Ecology Resources, . 21(7): 2350-2363 DOI
Leurs, N., Martinand-Mari, C., Venteo, S., Haitina, T., Debiais-Thibaud, M. (2021).
Evolution of Matrix Gla and Bone Gla Protein Genes in Jawed Vertebrates.
Frontiers in Genetics, . 12 DOI
Levin, Fredrik
Simulating Artificial Recombination for a Deep Convolutional Autoencoder.
Student thesis, 2021 Download fulltext
Lidén, M. (2021).
(2812) Proposal to reject the name Primula sawyeri (Dionysia sawyeri) (Primulaceae).
Taxon, . 70(2): 442-443 DOI
Liu, H., Söderhäll, K. (2021).
Introduction for special issue: Antiviral immunity in invertebrates.
Developmental and Comparative Immunology, . 122 DOI
Londono-Correa, Diego
Identifying genetic signatures of recent local adaptations in people from Ibiza.
Student thesis, 2021 Download fulltext
Lopez, J., Tafforeau, P., Clement, A., Klembara, J., Niedzwiedzki, G. et al. (2021).
New light shed on the early evolution of limb-bone growth plate and bone marrow.
eLIFE, . 10 DOI
Lundberg, Lovisa
The evolutionary history of phosphorus transporters in arbuscular mycorrhizal fungi.
Student thesis, 2021 Download fulltext
Mahadevaraju, S., Fear, J., Akeju, M., Galletta, B., Pinheiro, M. et al. (2021).
Dynamic sex chromosome expression in Drosophila male germ cells.
Nature Communications, . 12 DOI
Martinossi-Allibert, I., Veller, C., Ament-Velásquez, S., Vogan, A., Rüffler, C. et al. (2021).
Invasion and maintenance of meiotic drivers in populations of ascomycete fungi.
Evolution, . 75(5): 1150-1169 DOI
Martí, E., Milani, D., Bardella, V., Albuquerque, L., Song, H. et al. (2021).
Cytogenomic analysis unveils mixed molecular evolution and recurrent chromosomal rearrangements shaping the multigene families on Schistocerca grasshopper genomes.
Evolution, . 75(8): 2027-2041 DOI
Mehregan, I., Younesi, S., Lidén, M. (2021).
Donysia avia (Primulaceae), a new species from Zagros Mountains, Iran.
Phytotaxa, . 511(3): 296-300 DOI
Meidl, P., Furneaux, B., Tchan, K., Kluting, K., Ryberg, M. et al. (2021).
Soil fungal communities of ectomycorrhizal dominated woodlands across West Africa.
MycoKeys, . 81: 45-68 DOI
Meyer, A., Peyroteo Stjerna, R., Jolly, C., Schlebusch, C., Steyn, M. (2021).
A reassessment of archaeological human remains recovered from rock shelters in Cathkin Peak, South Africa.
Azania, . 56(4): 508-538 Epub ahead of print. DOI
Milani, D., Ruiz-Ruano, F., Camacho, J., Cabral-de-Mello, D. (2021).
Out of patterns, the euchromatic B chromosome of the grasshopper Abracris flavolineata is not enriched in high-copy repeats.
Heredity, . 127(5): 475-483 DOI
Moczydlowska-Vidal, M., Kear, B., Snitting, D., Liu, L., Lazor, P. et al. (2021).
Ediacaran metazoan fossils with siliceous skeletons from the Digermulen Peninsula of Arctic Norway.
Journal of Paleontology, 95(3): 440-475 DOI
Mouchlianitis, F., Bobori, D., Tsakoumis, E., Sapounidis, A., Kritikaki, E. et al. (2021).
Does fragmented river connectivity alter the reproductive behavior of the potamodromous fish Alburnus vistonicus?.
Hydrobiologia, . 848(17): 4029-4044 DOI
Olivares-Castro, G., Caceres-Jensen, L., Guerrero-Bosagna, C., Villagra, C. (2021).
Insect Epigenetic Mechanisms Facing Anthropogenic-Derived Contamination, an Overview.
Insects, . 12(9) DOI
Peona, V. (2021).
The exploration and evolution of the avian genomic dark matter.
Diss. Download fulltext
Peona, V., Blom, M., Xu, L., Burri, R., Sullivan, S. et al. (2021).
Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise.
Molecular Ecology Resources, . 21(1): 263-286 DOI
Peona, V., Palacios-Gimenez, O., Blommaert, J., Liu, J., Haryoko, T. et al. (2021).
The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities.
Philosophical Transactions of the Royal Society of London. Biological Sciences, 376(1833) DOI
Pereira, R., Ruiz-Ruano, F., Thomas, C., Perez-Ruiz, M., Jimenez-Bartolome, M. et al. (2021).
Mind the numt: Finding informative mitochondrial markers in a giant grasshopper genome.
Journal of Zoological Systematics and Evolutionary Research, . 59(3): 635-645 DOI
Pertille, F., Alvarez-Rodriguez, M., da Silva, A., Barranco, I., Roca, J. et al. (2021).
Sperm Methylome Profiling Can Discern Fertility Levels in the Porcine Biomedical Model.
International Journal of Molecular Sciences, . 22(5) DOI
Peteri, U., Pitkonen, J., de Toma, I., Nieminen, O., Utami, K. et al. (2021).
Urokinase plasminogen activator mediates changes in human astrocytes modeling fragile X syndrome.
Glia, . 69(12): 2947-2962 DOI
Peyroteo Stjerna, R. (2021).
Chronology of the burial activity of the last hunter-gatherers in the southwestern Iberian Peninsula, Portugal.
Radiocarbon, . 63(1): 265-299 DOI
Peyroteo Stjerna, R. (2021).
Buried side by side: The last hunter-gatherers of the south-western Iberian Peninsula through the lens of their mortuary practices.
I Dusan Boric, Dragana Antonovic, Bojana Mihailovic (red.) Foraging Assemblages, . 629-636
Peyroteo Stjerna, R., Lankheet, I. (2021).
Working in an Ancient DNA Lab - short video (Swedish).
Peyroteo Stjerna, R., Lankheet, I. (2021).
Working in an Ancient DNA Lab - short video.
Philippot, G., Hellsten, S., Viberg, H., Fredriksson, R. (2021).
Evaluation of the dentate gyrus in adult mice exposed to acetaminophen (paracetamol) on postnatal day 10.
International Journal of Developmental Neuroscience, . 81(1): 91-97 DOI
Pohl, J., Golovko, O., Carlsson, G., Örn, S., Schmitz, M. et al. (2021).
Gene co-expression network analysis reveals mechanisms underlying ozone-induced carbamazepine toxicity in zebrafish (Danio rerio) embryos.
Chemosphere, . 276 DOI
Pommery, Y., Scheyer, T., Neenan, J., Reich, T., Fernandez, V. et al. (2021).
Dentition and feeding in Placodontia: tooth replacement in Henodus chelyops.
BMC ECOLOGY AND EVOLUTION, . 21 DOI
Pyhajarvi, T., Mattila, T. (2021).
New model species for arctic-alpine plant molecular ecology.
Molecular Ecology Resources, . 21(3): 637-640 DOI
Qvarnström, M., Fikacek, M., Vikberg Wernström, J., Huld, S., Beutel, R. et al. (2021).
Exceptionally preserved beetles in a Triassic coprolite of putative dinosauriform origin.
Current Biology, . 31(15): 3374-+ DOI
Ramachandran, P., Augstein, F., Mazumdar, S., Van Nguyen, T., Minina, E. et al. (2021).
Abscisic acid signaling activates distinct VND transcription factors to promote xylem differentiation in Arabidopsis.
Current Biology, . 31(14): 3153-3161.e5 DOI
Ray, D., Jarochowska, E., Hughes, H., Claussen, A., Tingley, A. et al. (2021).
The Silurian Transgression of a Palaeoshoreline: The Area between Old Radnor and Presteigne, Welsh Borderlands.
Lithosphere, . 2021(1) DOI
Robert, A., Peona, V., Ottenburghs, J. (2021).
Digest: Population genomics reveals convergence toward melanism in different island populations.
Evolution, . 75(6): 1582-1584 DOI
Rozada, L., Allain, R., Vullo, R., Goedert, J., Augier, D. et al. (2021).
A Lower Cretaceous Lagerstatte from France: a taphonomic overview of the Angeac-Charente vertebrate assemblage.
Lethaia, . 54(2): 141-165 DOI
Saad, N., Bereketoglu, C., Pradhan, A. (2021).
Di(isononyl) cyclohexane-1,2-dicarboxylate (DINCH) alters transcriptional profiles, lipid metabolism and behavior in zebrafish larvae.
Heliyon, . 7(9) DOI
Sammils Baleiro, Marina
The positive effect of exercise on mood, as a non-motor symptom, in Parkinson's disease.
Student thesis, 2021 Download fulltext
Santander, M., Cabral-de-Mello, D., Taffarel, A., Marti, E., Marti, D. et al. (2021).
New insights into the six decades of Mesa's hypothesis of chromosomal evolution in Ommexechinae grasshoppers (Orthoptera: Acridoidea).
Zoological Journal of the Linnean Society, . 193(4): 1141-1155 DOI
Schartl, M., Kneitz, S., Ormanns, J., Schmidt, C., Anderson, J. et al. (2021).
The Developmental and Genetic Architecture of the Sexually Selected Male Ornament of Swordtails.
Current Biology, . 31(5): 911-922.e4 DOI
Schlebusch, C., Loog, L., Groucutt, H., King, T., Rutherford, A. et al. (2021).
Human origins in Southern African palaeo-wetlands?: Strong claims from weak evidence.
Journal of Archaeological Science, . 130 DOI
Schön, M., Zlatogursky, V., Singh, R., Poirier, C., Wilken, S. et al. (2021).
Single cell genomics reveals plastid-lacking Picozoa are close relatives of red algae.
Nature Communications, . 12(1) DOI
Seidensticker, D., Hubau, W., Verschuren, D., Fortes-Lima, C., de Maret, P. et al. (2021).
Population collapse in Congo rainforest from 400 CE urges reassessment of the Bantu Expansion.
Science Advances, . 7(7) DOI
Sengupta, D., Choudhury, A., Fortes-Lima, C., Aron, S., Whitelaw, G. et al. (2021).
Genetic substructure and complex demographic history of South African Bantu speakers.
Nature Communications, . 12(1) DOI
Serra, G., Guillaumin, A., Dumas, S., Vlcek, B., Wallén-Mackenzie, Å. (2021).
Midbrain Dopamine Neurons Defined by TrpV1 Modulate Psychomotor Behavior.
Frontiers in Neural Circuits, . 15 DOI
Sjödin, P., McKenna, J., Jakobsson, M. (2021).
Estimating divergence times from DNA sequences.
Genetics, . 217(4) DOI
Sjöstrand, A., Sjödin, P., Hegay, T., Nikolaeva, A., Shayimkulov, F. et al. (2021).
Taste perception and lifestyle: insights from phenotype and genome data among Africans and Asians.
European Journal of Human Genetics, . 29: 325-337 DOI
Smirnova, A., Mentor, A., Ranefall, P., Bornehag, C., Brunström, B. et al. (2021).
Increased apoptosis, reduced Wnt/β-catenin signaling, and altered tail development in zebrafish embryos exposed to a human-relevant chemical mixture.
Chemosphere, 264(1) DOI
Stelzer, C., Blommaert, J., Waldvogel, A., Pichler, M., Hecox-Lea, B. et al. (2021).
Comparative analysis reveals within-population genome size variation in a rotifer is driven by large genomic elements with highly abundant satellite DNA repeat elements.
BMC Biology, . 19 DOI
Stephens, Aubree
Non-motor symptoms and their use as markers for prodromal and early Parkinson's disease.
Student thesis, 2021 Download fulltext
Strassert, J., Irisarri, I., Williams, T., Burki, F. (2021).
A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids.
Nature Communications, . 12 DOI
Stöck, M., Kratochvíl, L., Kuhl, H., Rovatsos, M., Evans, B. et al. (2021).
A brief review of vertebrate sex evolution with a pledge for integrative research: towards 'sexomics'.
Philosophical Transactions of the Royal Society of London. Biological Sciences, 376(1832) DOI
Suh, A., Dion-Cote, A. (2021).
New Perspectives on the Evolution of Within-Individual Genome Variation and Germline/Soma Distinction.
Genome Biology and Evolution, . 13(6) DOI
Sulistyo, B., Larsson, K., Haelewaters, D., Ryberg, M. (2021).
Multigene phylogeny and taxonomic revision of Atheliales s.l.: Reinstatement of three families and one new family, Lobuliciaceae fam. nov..
Fungal Biology, . 125(3): 239-255 DOI
Sundberg, H., Kruys, Å., Bergsten, J., Ekman, S. (2021).
Coreomyces (Laboulbeniales) in Sweden, with two new species.
Nordic Journal of Botany, . 39(11) DOI
Svahn, T., Ast, J. (2021).
Effective dose and effect of dose modulation for localizer radiographs using applied and alternative settings on Toshiba/Canon CT systems.
Radiation Protection Dosimetry, . 195(3-4): 198-204 DOI
Svahn, T., Gordon, R., Ast, J., Riffel, J., Hartbauer, M. (2021).
Comparison of photon-counting and flat-panel digital mammmography for the purpose of 3D imaging using a novel image processing method.
Radiation Protection Dosimetry, . 195(3-4): 454-461 DOI
Svahn, T., Peric, L., Ast, J. (2021).
Influence of Different Arm Positions in the Localizer Radiograph(s) on Patient Dose during Exposure-Controlled CT Examinations of the Neck to Pelvis.
Tomography, . 7(3): 313-322 DOI
Svahn, T., Sjöberg, T., Shahgeldi, K., Zacharias, F., Ast, J. et al. (2021).
Comparison of Pulmonary Nodule Detection, Reading Times and Patient Doses of Ultra-Low Dose CT, Standard Dose CT and Digital Radiography.
Radiation Protection Dosimetry, . 196(3-4): 234-240 DOI
Svanholm, S., Säfholm, M., Brande-Lavridsen, N., Larsson, E., Berg, C. (2021).
Developmental reproductive toxicity and endocrine activity of propiconazole in the Xenopus tropicalis model.
Science of the Total Environment, 753 DOI
Svedberg, J., Vogan, A., Rhoades, N., Sarmarajeewa, D., Jacobson, D. et al. (2021).
An introgressed gene causes meiotic drive in Neurospora sitophila.
Proceedings of the National Academy of Sciences of the United States of America, . 118(17) DOI
Svensson, E., Günther, T., Hoischen, A., Hervella, M., Munters, A. et al. (2021).
Genome of Pesxtera Muierii skull shows high diversity and low mutational load in pre-glacial Europe.
Current Biology, . 31(14): 2973-U21 DOI
Thulin, M. (2021).
Two new species of Commicarpus (Nyctaginaceae) from the Horn of Africa.
Nordic Journal of Botany, . 39(4) DOI
Thulin, M. (2021).
Rapport från en jordhög i Östergarn: nya fynd av hålrot och läkemalva, och getruta, grekisk fingerborgsblomma och ljungaster nya för Gotland.
Rindi, 41(2): 74-77
Thulin, M., Gilbert, M., Kaariye, H. (2021).
Ceropegia longirostris sp. nov. (Apocynaceae–Asclepiadoideae) from Ethiopia and Kenya.
Nordic Journal of Botany, . 39(12) DOI
Thulin, M., Larsson, A. (2021).
New country records for species of Boraginaceae and Lamiaceae in the Horn of Africa hotspot.
Phytotaxa, . 513(1): 62-68 DOI
Thulin, M., Marticorena, A., Swenson, U. (2021).
Molina's species of Lucuma: neotypifications and nomenclatural implications.
Gayana. Botanica, 78(2): 162-171
Tice, A., Zihala, D., Panek, T., Jones, R., Salomaki, E. et al. (2021).
PhyloFisher: A phylogenomic package for resolving eukaryotic relationships.
PLoS biology, . 19(8) DOI
Tsakoumis, E. (2021).
The role of leptin in zebrafish (Danio rerio): Novel insights into appetite regulation and reproduction.
Diss. Download fulltext
Tuovinen, V., Millanes, A., Freire-Rallo, S., Rosling, A., Wedin, M. (2021).
Tremella macrobasidiata and Tremella variae have abundant and widespread yeast stages in Lecanora lichens.
Environmental Microbiology, . 23(5): 2484-2498 DOI
Vafaee, Y., Mohammadi, G., Nazari, F., Fatahi, M., Kaki, A. et al. (2021).
Phenotypic characterization and seed-micromorphology diversity of the threatened terrestrial orchids: implications for conservation.
South African Journal of Botany, 137: 386-398 DOI
van der Stel, W., Carta, G., Eakins, J., Delp, J., Suciu, I. et al. (2021).
New Approach Methods (NAMs) Supporting Read-Across: Two Neurotoxicity AOP-based IATA Case Studies.
Altex, . 38(4): 615-635 DOI
Vicente, M., Lankheet, I., Russell, T., Hollfelder, N., Coetzee, V. et al. (2021).
Male-biased migration from East Africa introduced pastoralism into southern Africa.
BMC Biology, 19 DOI
Vogan, A. (2021).
A flurry of sex-ratio distorters.
Nature Ecology & Evolution, . 5(12): 1574-1575 DOI
Vogan, A., Ament-Velásquez, S., Bastiaans, E., Wallerman, O., Saupe, S. et al. (2021).
The Enterprise, a massive transposon carrying Spok meiotic drive genes.
Genome Research, 31(5): 789-798 DOI
Vogan, A., Miller, A., Silar, P. (2021).
(2803) Proposal to change the conserved type of Podospora, nom. cons. (Ascomycota).
Taxon, . 70(2): 429-430 DOI
Vrettou, M., Yan, L., Nilsson, K., Wallén-Mackenzie, Å., Nylander, I. et al. (2021).
DNA methylation of Vesicular Glutamate Transporters in the mesocorticolimbic brain following early-life stress and adult ethanol exposure-an explorative study.
Scientific Reports, . 11(1) DOI
Waldmann, L. (2021).
The role of Nkx3.2 and Gdf5 during zebrafish skeletal development.
Diss. Download fulltext
Waldmann, L., Leyhr, J., Zhang, H., Öhman, C., Allalou, A. et al. (2021).
The broad role of Nkx3.2 in the development of the zebrafish axial skeleton.
PLOS ONE, . 16(8) DOI
Weber, K., Winkler, D., Kaiser, T., Zigaite, Z., Tuetken, T. (2021).
Dental microwear texture analysis on extant and extinct sharks: Ante- or post-mortem tooth wear?.
Palaeogeography, Palaeoclimatology, Palaeoecology, . 562 DOI
Wilhelmsson, P., Pawelczyk, O., Jaenson, T., Waldenström, J., Olsen, B. et al. (2021).
Three Babesia species in Ixodes ricinus ticks from migratory birds in Sweden.
Parasites & Vectors, . 14 DOI
Xavier, J., Rees, D., Pereira, R., Colaco, A., Pham, C. et al. (2021).
Diversity, Distribution and Phylogenetic Relationships of Deep-Sea Lithistids (Porifera, Heteroscleromorpha) of the Azores Archipelago.
Frontiers in Marine Science, . 8 DOI
Xiao, L., Johansson, S., Tenje, M., Behrendt, L. (2021).
Combined effects of thermal stress and UV filter exposure on single cells of Symbiodinium.
I ICRS 2021 - 14th International Coral Reef Symposium
Yaka, R., Mapelli, I., Kaptan, D., Dogu, A., Chylenski, M. et al. (2021).
Variable kinship patterns in Neolithic Anatolia revealed by ancient genomes.
Current Biology, 31(11): 2455-2468.e18 DOI
Yurtman, E., Ozer, O., Yuncu, E., Dagtas, N., Koptekin, D. et al. (2021).
Archaeogenetic analysis of Neolithic sheep from Anatolia suggests a complex demographic history since domestication.
Communications Biology, . 4(1) DOI
Zanders, S., Johannesson, H. (2021).
Molecular Mechanisms and Evolutionary Consequences of Spore Killers in Ascomycetes.
Microbiology and molecular biology reviews, . 85(4) DOI
Zerbinato de Andrade Silva, D., Ruiz-Ruano, F., Utsunomia, R., Martin-Pecina, M., Pena Castro, J. et al. (2021).
Long-term persistence of supernumerary B chromosomes in multiple species of Astyanax fish.
BMC Biology, . 19 DOI
Zhu, Y., Giles, S., Young, G., Hu, Y., Bazzi, M. et al. (2021).
Endocast and Bony Labyrinth of a Devonian "Placoderm'' Challenges Stem Gnathostome Phylogeny.
Current Biology, . 31(5): 1112-1118 DOI
Zlatogursky, V., Shishkin, Y., Drachko, D., Burki, F. (2021).
The long-time orphan protist Meringosphaera mediterranea Lohmann, 1902 [1903] is a centrohelid heliozoan.
Journal of Eukaryotic Microbiology, . 68(5) DOI
Östman, S., Friis Møller, L. (2021).
Gross morphology and cnidae of edwardsiella anemones and larvae (Anthozoa, Edwardsiidae) from the Swedish West Coast.
Acta Zoologica, . 102(4): 467-482 DOI
Černý, V., Fortes-Lima, C., Tříska, P. (2021).
Demographic history and admixture dynamics in African Sahelian populations.
Human Molecular Genetics, 30(R1): R29-R36 DOI
Ahi, E., Duenser, A., Singh, P., Gessl, W., Sturmbauer, C. (2020).
Appetite regulating genes may contribute to herbivory versus carnivory trophic divergence in haplochromine cichlids.
PeerJ, . 8 DOI
Ahi, E., Lecaudey, L., Ziegelbecker, A., Steiner, O., Glabonjat, R. et al. (2020).
Comparative transcriptomics reveals candidate carotenoid color genes in an East African cichlid fish.
BMC Genomics, . 21 DOI
Ahi, E., Lecaudey, L., Ziegelbecker, A., Steiner, O., Goessler, W. et al. (2020).
Expression levels of the tetratricopeptide repeat protein gene ttc39b covary with carotenoid-based skin colour in cichlid fish.
Biology Letters, 16(11) DOI
Ahlberg, P. (2020).
Biographical item: Jennifer Clack (1947-2020) Obituary: Palaeontologist who described how vertebrates moved from water to land. In: Nature, volume 580, issue 7805, page 587.
DOI
Ahlberg, P., Clack, J. (2020).
The smallest known Devonian tetrapod shows unexpectedly derived features.
Royal Society Open Science, . 7(4) DOI
Ahlberg, P., Haitina, T. (2020).
Chapter 8 Neural Crest in Fossil Vertebrates:: What, If Anything, Can We Know?.
I Brian Frank Eames, Daniel Meulemans Medeiros, Igor Adameyko (red.) Evolving Neural Crest Cells, . 1-294 DOI
Aleix-Mata, G., Gutierrez, J., Ruiz-Ruano, F., Lorite, P., Marchal, J. et al. (2020).
The complete mitochondrial genome of Talpa aquitania (Talpidae; Insectivora), a mole species endemic to northern Spain and southern France.
Molecular Biology Reports, . 47(3): 2397-2403 DOI
Alejandro Zamora-Briseno, J., Ruiz-May, E., Miguel Elizalde-Contreras, J., Margarita Hernandez-Velazquez, I., Hernandez-Perez, A. et al. (2020).
iTRAQ-Based Proteomic Profile Analysis of the Hepatopancreas of Caribbean Spiny Lobsters Infected WithPanulirus argusVirus 1: Metabolic and Physiological Implications.
Frontiers in Microbiology, 11 DOI
Ament-Velásquez, S. (2020).
Drivers of evolutionary change in Podospora anserina.
Diss. Download fulltext
Ament-Velásquez, S., Johannesson, H., Giraud, T., Debuchy, R., Saupe, S. et al. (2020).
The taxonomy of the model filamentous fungus Podospora anserina.
MycoKeys, 51-69 DOI
Ampoorter, E., Barbaro, L., Jactel, H., Baeten, L., Boberg, J. et al. (2020).
Tree diversity is key for promoting the diversity and abundance of forest-associated taxa in Europe.
Oikos, 129(2): 133-146 DOI
Anava, S., Neuhof, M., Gingold, H., Sagy, O., Munters, A. et al. (2020).
Illuminating Genetic Mysteries of the Dead Sea Scrolls.
Cell, . 181(6): 1218-+ DOI
Attoff, K., Johansson, Y., Cediel-Ulloa, A., Lundqvist, J., Gupta, R. et al. (2020).
Acrylamide alters CREB and retinoic acid signalling pathways during differentiation of the human neuroblastoma SH-SY5Y cell line.
Scientific Reports, . 10 DOI
Banote, R., Chebli, J., Satir, T., Varshney, G., Camacho, R. et al. (2020).
Amyloid precursor protein-b facilitates cell adhesion during early development in zebrafish.
Scientific Reports, . 10(1) DOI
Behrendt, L., Salek, M., Trampe, E., Fernandez, V., Lee, K. et al. (2020).
PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae.
Science Advances, . 6(36) DOI
Behrendt, L., Trampe, E., Nord, N., Nguyen, J., Kuhl, M. et al. (2020).
Life in the dark: far-red absorbing cyanobacteria extend photic zones deep into terrestrial caves.
Environmental Microbiology, . 22(3): 952-963 DOI
Bell, D., Lin, Q., Gerelle, W., Joya, S., Chang, Y. et al. (2020).
Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution.
American Journal of Botany, . 107(1): 91-115 DOI
Bimpisidis, Z., König, N., Wallén-Mackenzie, Å. (2020).
Two Different Real-Time Place Preference Paradigms Using Optogenetics within the Ventral Tegmental Area of the Mouse.
Journal of Visualized Experiments . DOI
Blommaert, J. (2020).
Genome size evolution: towards new model systems for old questions.
Proceedings of the Royal Society of London. Biological Sciences, . 287(1933) DOI
Bogdanska, J., Borg, D., Bergström, U., Mellring, M., Bergman, A. et al. (2020).
Tissue distribution of C-14-labelled perfluorooctanoic acid in adult mice after 1-5 days of dietary exposure to an experimental dose or a lower dose that resulted in blood levels similar to those detected in exposed humans.
Chemosphere, . 239 DOI
Bouakaze, C., Delehelle, F., Saenz-Oyhereguy, N., Moreira, A., Schiavinato, S. et al. (2020).
Predicting haplogroups using a versatile machine learning program (PredYMaLe) on a new mutationally balanced 32 Y-STR multiplex (CombYplex): Unlocking the full potential of the human STR mutation rate spectrum to estimate forensic parameters.
Forensic Science International, . 48 DOI
Brazeau, M., Giles, S., Dearden, R., Jerve, A., Ariunchimeg, Y. et al. (2020).
Endochondral bone in an Early Devonian 'placoderm' from Mongolia.
Nature Ecology & Evolution, 4(11): 1477-1484 DOI
Bremer, O., Jarochowska, E., Märss, T. (2020).
Vertebrate remains and conodonts in the upper Silurian Hamra and Sundre formations of Gotland, Sweden.
GFF, . 142(1): 52-80 DOI
Breton, G. (2020).
Human demographic history: Insights on the human past based on genomes from Southern through Central Africa.
Diss. Download fulltext
Burki, F., Roger, A., Brown, M., Simpson, A. (2020).
The New Tree of Eukaryotes.
Trends in Ecology & Evolution, . 35(1): 43-55 DOI
Byrne, H., Green, J., Balbus, S., Ahlberg, P. (2020).
Tides: A key environmental driver of osteichthyan evolution and the fish-tetrapod transition?.
Proceedings of the Royal Society. Mathematical, Physical and Engineering Sciences, 476(2242): 20200355-20200355 DOI
Carlsson, B., Svensson, B., Ljungstrand, E., Lindell, T., Thulin, M. (2020).
Det är fjädersvingel som växer på Gotlands sandstränder [Vulpia fasciculata found on sandy beaches on Gotland, SE Sweden].
Svensk Botanisk Tidskrift, . 114(1): 4-8
Chen, D., Blom, H., Sanchez, S., Tafforeau, P., Märss, T. et al. (2020).
The developmental relationship between teeth and dermal odontodes in the most primitive bony fish Lophosteus.
eLIFE, 9 DOI
Chen, H., Jolly, C., Bublys, K., Marcu, D., Immler, S. (2020).
Trade-off between somatic and germline repair in a vertebrate supports the expensive germ line hypothesis.
Proceedings of the National Academy of Sciences of the United States of America, . 117(16): 8973-8979 DOI
Clarac, F., Scheyer, T., Desojo, J., Cerda, I., Sanchez, S. (2020).
The evolution of dermal shield vascularization in Testudinata and Pseudosuchia: phylogenetic constraints versus ecophysiological adaptations.
Philosophical Transactions of the Royal Society of London. Biological Sciences, . 375(1793) DOI
Codjia, J., Cai, Q., Zhou, S., Luo, H., Ryberg, M. et al. (2020).
Morphology, Multilocus Phylogeny, and Toxin Analysis Reveal Amanita albolimbata, the First Lethal Amanita Species From Benin, West Africa.
Frontiers in Microbiology, 11 DOI
Cornille, Alexis; Clarac, François
The Tetrapodomorph Pectoral Fin’s Biomechanical Adaptations to Near Shore Environments: Finite Element Analysis on the Humerus of Eusthenopteron foordi.
Student thesis, 2020 Download fulltext
Coutinho, A., Günther, T., Munters, A., Svensson, E., Götherström, A. et al. (2020).
The Neolithic Pitted Ware culture foragers were culturally but not genetically influenced by the Battle Axe culture herders.
American Journal of Physical Anthropology, 172(4): 638-649 DOI
Davesne, D., Schmitt, A., Fernandez, V., Benson, R., Sanchez, S. (2020).
Three-dimensional characterization of osteocyte volumes at multiple scales, and its relationship with bone biology and genome evolution in ray-finned fishes.
Journal of Evolutionary Biology, 33(6): 808-830 DOI
Debortoli, G., Abbatangelo, C., Ceballos, F., Fortes-Lima, C., Norton, H. et al. (2020).
Novel insights on demographic history of tribal and caste groups from West Maharashtra (India) using genome-wide data.
Scientific Reports, 10(1) DOI
Drakvik, E., Altenburger, R., Aoki, Y., Backhaus, T., Bahadori, T. et al. (2020).
Statement on advancing the assessment of chemical mixtures and their risks for human health and the environment.
Environment International, . 134 DOI
Durkin, L., Jansson, T., Sanchez, M., Khomich, M., Ryberg, M. et al. (2020).
When mycologists describe new species, not all relevant information is provided (clearly enough).
MycoKeys, . 109-128 DOI
Eggens, F., Jafari, F., Thollesson, M., Crameri, S., Zarre, S. et al. (2020).
Phylogeny and species delimitation in Silene sect. Arenosae (Caryophyllaceae): a new section.
PhytoKeys, . 1-34 DOI
Eggens, F., Jafari, F., Zarre, S., Oxelman, B. (2020).
(2755) Proposal to conserve the name Silene linearis Decne. against S. linearis Sweet (Caryophyllaceae).
Taxon, . 69(4): 825-826 DOI
Eklöf, H., Bernhardsson, C., Ingvarsson, P. (2020).
Comparing the Effectiveness of Exome Capture Probes, Genotyping by Sequencing and Whole-Genome Re-Sequencing for Assessing Genetic Diversity in Natural and Managed Stands of Picea abies.
Forests, 11(11) DOI
Engdahl, E., Ruegg, J. (2020).
Prenatal Exposure to Endocrine Disrupting Chemicals and Their Effect on Health Later in Life.
I Teperino R. (red.) Beyond Our Genes, . 53-77 DOI
Estefa, J. (2020).
Long bone growth and evolution revealed by three-dimensional imaging.
Diss. Download fulltext
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q. et al. (2020).
Dense sampling of bird diversity increases power of comparative genomics.
Nature, . 587(7833): 252-257 DOI
Ferm, J. (2020).
On Ingeae Systematics of synandrous mimosoids.
Diss. Download fulltext
Ferretti, A., Milani, D., Palacios Gimenez, O., Ruiz-Ruano, F., Cabral-de-Mello, D. (2020).
High dynamism for neo-sex chromosomes: satellite DNAs reveal complex evolution in a grasshopper.
Heredity, . 125(3): 124-137 DOI
Feuerborn, T., Palkopoulou, E., van der Valk, T., von Seth, J., Munters, A. et al. (2020).
Competitive mapping allows for the identification and exclusion of human DNA contamination in ancient faunal genomic datasets.
BMC Genomics, 21(1) DOI
Forero Mejia, A., Molodtsova, T., Östman, C., Bavestrello, G., Rouse, G. (2020).
Molecular phylogeny of Ceriantharia (Cnidaria:Anthozoa) reveals non-monophyly of traditionally accepted families.
Zoological Journal of the Linnean Society, 190(2): 397-416 DOI
Frohlich, M., Thulin, M., Chase, M. (2020).
Ninety-three new combinations in Euploca for species of Heliotropium section Orthostachys (Boraginaceae sensu APG).
Phytotaxa, . 434(1): 13-21 DOI
Furneaux, B. (2020).
Fungal communities of West African ectomycorrhizal woodlands.
Diss. Download fulltext
Galbraith, J., Ludington, A., Suh, A., Sanders, K., Adelson, D. (2020).
New Environment, New Invaders-Repeated Horizontal Transfer of LINEs to Sea Snakes.
Genome Biology and Evolution, . 12(12): 2370-2383 DOI
Galus, M., Fraz, S., Gugilla, A., Jönsson, M., Wilson, J. (2020).
Prostaglandins prevent acetaminophen induced embryo toxicity in zebrafish (Danio rerio).
Environmental Toxicology and Pharmacology, . 80 DOI
Gao, K., Tian, J., Wu, Y., Mein, P., Zhang, Z. et al. (2020).
Induction of Cytochrome P4501 Genes by Various Inducers in Rainbow Trout (Oncorhynchus mykiss).
Journal of Coastal Research, . 37(1): 143-148 DOI
Ge, Z., Wu, J., Hao, Y., Zhang, Q., An, Y. et al. (2020).
The genus Catathelasma (Catathelasmataceae, Basidiomycota) in China.
MycoKeys, . 123-138 DOI
Gemmell, N., Rutherford, K., Prost, S., Tollis, M., Winter, D. et al. (2020).
The tuatara genome reveals ancient features of amniote evolution.
Nature, . 584(7821): 403-409 DOI
Ghorbani, A., Mosaddegh, M., Esmaeili, S., De Boer, H. (2020).
Molecular Authentication of Radix Behen Albi ("Bahman Sefid") Commercial Products Reveals Widespread Adulteration.
Research Journal of Pharmacognosy, . 7(4): 57-64 DOI
Gilbert Temu, S. (2020).
Lichens in Mountain Rainforests of Tanzania: Studies of Usnea and Calicioids.
Diss. Download fulltext
Grandi, G., Chitimia-Dobler, L., Choklikitumnuey, P., Strube, C., Springer, A. et al. (2020).
First records of adult Hyalomma marginatum and H. rufipes ticks (Acari: Ixodidae) in Sweden.
Ticks and Tick-borne Diseases, 11(3) DOI
Guillaumin, A. (2020).
The subthalamic nucleus in motor and affective functions: An optogenetic in vivo-investigation.
Diss. Download fulltext
Hernandez-Perez, A., Noonin, C., Söderhäll, K., Söderhäll, I. (2020).
Environmental concentrations of sulfamethoxazole increase crayfish Pacifastacus leniusculus susceptibility to White Spot Syndrome Virus.
Fish and Shellfish Immunology, . 102: 177-184 DOI
Hoffman, T., Wilhelmsson, P., Barboutis, C., Fransson, T., Jaenson, T. et al. (2020).
A divergent Anaplasma phagocytophilum variant in an Ixodes tick from a migratory bird; Mediterranean basin.
Infection Ecology & Epidemiology, 10(1) DOI
Hollfelder, N., Erasmus, J., Hammarén, R., Vicente, M., Jakobsson, M. et al. (2020).
Patterns of African and Asian admixture in the Afrikaner population of South Africa.
BMC Biology, 18(1) DOI
Hosseini, S., Meunier, C., Nguyen, D., Reimegård, J., Johannesson, H. (2020).
Comparative analysis of genome-wide DNA methylation in Neurospora.
Epigenetics, 15(9): 972-987 DOI
Hussein, J. (2020).
Polyporoid fungi of Tanzania: Taxonomy, transcriptomics and biochemical analyses of Kusaghiporia usambarensis and Piptoporellus baudonii.
Diss. Download fulltext
Höglund, A., Henriksen, R., Fogelholm, J., Churcher, A., Guerrero-Bosagna, C. et al. (2020).
The methylation landscape and its role in domestication and gene regulation in the chicken.
Nature Ecology & Evolution, . 4(12): 1713-1724 DOI
Irisarri, I., Uribe, J., Eernisse, D., Zardoya, R. (2020).
A mitogenomic phylogeny of chitons (Mollusca: Polyplacophora).
BMC Evolutionary Biology, 20(1) DOI
Jafari, F., Zarre, S., Gholipour, A., Eggens, F., Rabeler, R. et al. (2020).
A new taxonomic backbone for the infrageneric classification of the species-rich genusSilene(Caryophyllaceae).
Taxon, . 69(2): 337-368 DOI
Jamy, M., Foster, R., Barbera, P., Czech, L., Kozlov, A. et al. (2020).
Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity.
Molecular Ecology Resources, 20(2): 429-443 DOI
Jones, G., Devadatha, B., Abdel-Wahab, M., Dayarathne, M., Zhang, S. et al. (2020).
Phylogeny of new marine Dothideomycetes and Sordariomycetes from mangroves and deep-sea sediments.
Botanica Marina, 63(2): 155-181 DOI
Joshi, N., Ghorbani, A., Siwakoti, M., Kehlenbeck, K. (2020).
Utilization pattern and indigenous knowledge of wild medicinal plants among three ethnic groups in Makawanpur district, Central Nepal.
Journal of Ethnopharmacology, . 262 DOI
Junkunlo, K., Söderhäll, K., Söderhäll, I. (2020).
A transcription factor glial cell missing (Gcm) in the freshwater crayfish Pacifastacus leniusculus.
Developmental and Comparative Immunology, 113 DOI
Junkunlo, K., Söderhäll, K., Söderhäll, I. (2020).
Transglutaminase 1 and 2 are localized in different blood cells in the freshwater crayfish Pacifastacus leniusculus.
Fish and Shellfish Immunology, . 104: 83-91 DOI
Juras, A., Makarowicz, P., Chylenski, M., Ehler, E., Malmström, H. et al. (2020).
Mitochondrial genomes from Bronze Age Poland reveal genetic continuity from the Late Neolithic and additional genetic affinities with the steppe populations.
American Journal of Physical Anthropology, . 172(2): 176-188 DOI
Kalsoom Khan, F., Kluting, K., Tangrot, J., Urbina, H., Ammunet, T. et al. (2020).
Naming the untouchable - environmental sequences and niche partitioning as taxonomical evidence in fungi.
IMA Fungus, . 11 DOI
Kundrát, M., Coria, R., Manning, T., Snitting, D., Chiappe, L. et al. (2020).
Specialized Craniofacial Anatomy of a Titanosaurian Embryo from Argentina.
Current Biology, 30(21): 4263-4269.e2 DOI
Köljalg, U., Nilsson, H., Schigel, D., Tedersoo, L., Larsson, K. et al. (2020).
The Taxon Hypothesis Paradigm - On the Unambiguous Detection and Communication of Taxa.
Microorganisms, . 8(12) DOI
König, N., Bimpisidis, Z., Dumas, S., Wallén-Mackenzie, Å. (2020).
Selective Knockout of the Vesicular Monoamine Transporter 2 (Vmat2) Gene in Calbindin2/Calretinin-Positive Neurons Results in Profound Changes in Behavior and Response to Drugs of Abuse.
Frontiers in Behavioral Neuroscience, . 14 DOI
Laake, I., Feiring, B., Jonassen, C., Pettersson, J., Frengen, T. et al. (2020).
Concurrent Infection With Multiple Human Papillomavirus Types Among Unvaccinated and Vaccinated 17-Year-Old Norwegian Girls.
Journal of Infectious Diseases, . 226(4): 625-633 DOI
Li, J., Zarzar, T., White, J., Indencleef, K., Hoskens, H. et al. (2020).
Robust genome-wide ancestry inference for heterogeneous datasets: illustrated using the 1,000 genome project with 3D facial images.
Scientific Reports, 10(1) DOI
Lidén, M. (2020).
(002-003) Proposal to change the phrasing of Article 7.2.
Taxon, . 69(3): 623-624 DOI
Lidén, M. (2020).
193 and 246 of Philosophia botanica do not support that Linnaeus was a "typologist".
Taxon, . 69(2): 213-216 DOI
Lidén, M., Bharali, P. (2020).
Flowers of the Se La: Alpine plants of NW Arunachal Pradesh.
Download fulltext
Lilja, T., Eklof, D., Jaenson, T., Lindstrom, A., Terenius, O. (2020).
Single nucleotide polymorphism analysis of the ITS2 region of two sympatric malaria mosquito species in Sweden: Anopheles daciaeandAnopheles messeae.
Medical and Veterinary Entomology, . 34(3): 364-368 DOI
Ling, J., Vinnersten, T., Hesson, J., Bohlin, J., Roligheten, E. et al. (2020).
Identification of hepatitis C virus in the common bed bug - a potential, but uncommon route for HCV infection?.
Emerging Microbes & Infections, . 9(1): 1429-1431 DOI
Lopez, J., Klembara, J., Tafforeau, P., Sanchez, S. (2020).
Limb-bone development of seymouriamorphs: implications for the evolution of growth strategy in stem amniotes.
Frontiers in Earth Science, 8 DOI
Lupu, D., Andersson, P., Bornehag, C., Demeneix, B., Fritsche, E. et al. (2020).
The ENDpoiNTs Project: Novel Testing Strategies for Endocrine Disruptors Linked to Developmental Neurotoxicity.
International Journal of Molecular Sciences, . 21(11) DOI
Lutgen, D., Ritter, R., Olsen, R., Schielzeth, H., Gruselius, J. et al. (2020).
Linked-read sequencing enables haplotype-resolved resequencing at population scale.
Molecular Ecology Resources, . 20(5): 1311-1322 DOI
Martinossi-Allibert, I., Rönn, J., Immonen, E. (2020).
Female-specific resource limitation does not make the opportunity for selection more female biased.
Evolution, . 74(12): 2714-2724 DOI
Maturi, N., Tan, E., Xie, Y., Sundström, A., Bergström, T. et al. (2020).
A molecularly distinct subset of glioblastoma requires serum-containing media to establish sustainable bona fide glioblastoma stem cell cultures.
Glia, . 68(6): 1228-1240 DOI
Mentor, A. (2020).
Developmental exposure to mixtures of environmental pollutants: Studies on metabolism, developmental processes, and reproductive organs in zebrafish and chicken embryos.
Diss. Download fulltext
Mentor, A., Bornehag, C., Jönsson, M., Mattsson, A. (2020).
A suggested bisphenol A metabolite (MBP) interfered with reproductive organdevelopment in the chicken embryo while a human-relevant mixture ofphthalate monoesters had no such effects.
Journal of Toxicology and Environmental Health, . 83(2): 66-81 DOI
Mentor, A., Brunström, B., Mattsson, A., Jönsson, M. (2020).
Developmental exposure to a human relevant mixture of endocrine disruptors alters metabolism and adipogenesis in zebrafish (Danio rerio).
Chemosphere, . 238 DOI
Mentor, A., Wänn, M., Brunström, B., Jönsson, M., Mattsson, A. (2020).
Bisphenol AF and Bisphenol F Induce Similar Feminizing Effects in Chicken Embryo Testis as Bisphenol A.
Toxicological Sciences, . 178(2): 239-250 DOI
Montoliu-Nerin, M., Sanchez-Garcia, M., Bergin, C., Grabherr, M., Ellis, B. et al. (2020).
Building de novo reference genome assemblies of complex eukaryotic microorganisms from single nuclei.
Scientific Reports, . 10(1) DOI
Mora, P., Vela, J., Ruiz-Ruano, F., Ruiz-Mena, A., Montiel, E. et al. (2020).
Satellitome Analysis in the Ladybird Beetle Hippodamia variegata(Coleoptera, Coccinellidae).
Genes, . 11(7) DOI
Naidoo, T., Xu, J., Vicente, M., Malmström, H., Soodyall, H. et al. (2020).
Y-Chromosome Variation in Southern African Khoe-San Populations Based on Whole-Genome Sequences.
Genome Biology and Evolution, . 12(7): 1031-1039 DOI
Niedzwiedzki, G., Szrek, P. (2020).
Non-tetrapod trace fossils from the Middle Devonian tetrapod tracksite at Zachelmie Quarry, Holy Cross Mountains, Poland.
Palaeogeography, Palaeoclimatology, Palaeoecology, 553 DOI
Ocampo Daza, D., Haitina, T. (2020).
Reconstruction of the Carbohydrate 6-O Sulfotransferase Gene Family Evolution in Vertebrates Reveals Novel Member, CHST16, Lost in Amniotes.
Genome Biology and Evolution, . 12(7): 993-1012 DOI
Orton, F., Svanholm, S., Jansson, E., Carlsson, Y., Eriksson, A. et al. (2020).
A laboratory investigation into features of morphology and physiology for their potential to predict reproductive success in male frogs.
PLOS ONE, 15(11) DOI
Palacios-Gimenez, O., Koelman, J., Palmada-Flores, M., Bradford, T., Jones, K. et al. (2020).
Comparative analysis of morabine grasshopper genomes reveals highly abundant transposable elements and rapidly proliferating satellite DNA repeats.
BMC Biology, 18(1) DOI
Pawlak, W., Talanda, M., Sulej, T., Niedzwiedzki, G. (2020).
Dipnoan from the Upper Triassic of East Greenland and remarks about palaeobiogeography of Ptychoceratodus.
Acta Palaeontologica Polonica, 65(3): 561-574 DOI
Pertille, F., Ibelli, A., Sharif, M., Poleti, M., Frohlich, A. et al. (2020).
Putative Epigenetic Biomarkers of Stress in Red Blood Cells of Chickens Reared Across Different Biomes.
Frontiers in Genetics, 11 DOI
Philippot, G. (2020).
Neurodevelopmental Consequences of Exposure to Paracetamol (Acetaminophen) and Related Drugs: Experimental studies in mice.
Diss. Download fulltext
Phillips, M., Tang, W., Robinson, M., Ocampo Daza, D., Hassan, K. et al. (2020).
Evidence of chitin in the ampullae of Lorenzini of chondrichthyan fishes.
Current Biology, 30(20): R1254-R1255 DOI
Pindakiewicz, M., Talanda, M., Sulej, T., Niedzwiedzki, G., Sennikov, A. et al. (2020).
Feeding convergence among ray-finned fishes: Teeth of the herbivorous actinopterygians from the latest Permian of East European Platform, Russia.
Acta Palaeontologica Polonica, . 65(1): 71-79 DOI
Polme, S., Abarenkov, K., Henrik Nilsson, R., Lindahl, B., Clemmensen, K. et al. (2020).
FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles.
Fungal diversity, . 105(1): 1-16 DOI
Pottmeier, P., Doszyn, O., Peuckert, C., Jazin, E. (2020).
Increased Expression of Y-Encoded Demethylases During Differentiation of Human Male Neural Stem Cells.
Stem Cells and Development, . 29(23): 1497-1509 DOI
Qvarnström, M. (2020).
Who ate whom? Paleoecology revealed through synchrotron microtomography of coprolites (fossil feces).
Diss. Download fulltext
Ramachandran, P. (2020).
Stelar Performance Under Drought: Regulation of Developmental Robustness and Plasticity of the Arabidopsis Root Xylem.
Diss. Download fulltext
Ramachandran, P., Augstein, F., Nguyen, V., Carlsbecker, A. (2020).
Coping With Water Limitation: Hormones That Modify Plant Root Xylem Development.
Frontiers in Plant Science, 11 DOI
Repouskou, A., Papadopoulou, A., Panagiotidou, E., Trichas, P., Lindh, C. et al. (2020).
Long term transcriptional and behavioral effects in mice developmentally exposed to a mixture of endocrine disruptors associated with delayed human neurodevelopment.
Scientific Reports, . 10(1) DOI
Samarasinghe, H., Vogan, A., Pum, N., Xu, J. (2020).
Patterns of allele distribution in a hybrid population of the Cryptococcus neoformans species complex.
Mycoses, . 63(3): 275-283 DOI
Sanchez-Garcia, M., Ryberg, M., Kalsoom Khan, F., Varga, T., Nagy, L. et al. (2020).
Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi.
Proceedings of the National Academy of Sciences of the United States of America, . 117(51): 32528-32534 DOI
Santoferrara, L., Burki, F., Filker, S., Logares, R., Dunthorn, M. et al. (2020).
Perspectives from Ten Years of Protist Studies by High-Throughput Metabarcoding.
Journal of Eukaryotic Microbiology, . 67(5): 612-622 DOI
Schlebusch, C. (2020).
Sahelian pastoralism from the perspective of variants associated with lactase persistence..
American Journal of Physical Anthropology, 173(3): 423-436 DOI
Schlebusch, C., Sjödin, P., Breton, G., Günther, T., Naidoo, T. et al. (2020).
Khoe-San Genomes Reveal Unique Variation and Confirm the Deepest Population Divergence in Homo sapiens.
Molecular biology and evolution, . 37(10): 2944-2954 DOI
Schmidt, A., Regalado, L., Weststrand, S., Korall, P., Sadowski, E. et al. (2020).
Selaginella was hyperdiverse already in the Cretaceous.
New Phytologist, 228(4): 1176-1182 DOI
Semo, A., Gaya-Vidal, M., Fortes-Lima, C., Alard, B., Oliveira, S. et al. (2020).
Along the Indian Ocean Coast: Genomic Variation in Mozambique Provides New Insights into the Bantu Expansion.
Molecular biology and evolution, . 37(2): 406-416 DOI
Sharif, B., Burgarella, C., Cormier, F., Mournet, P., Causse, S. et al. (2020).
Genome-wide genotyping elucidates the geographical diversification and dispersal of the polyploid and clonally propagated yam (Dioscorea alata).
Annals of Botany, . 126(6): 1029-1038 DOI
Sirikharin, R., Söderhäll, K., Söderhäll, I. (2020).
The N-terminal peptide generated after activation of prophenoloxidase affects crayfish hematopoiesis.
Developmental and Comparative Immunology, . 108 DOI
Skott, E., Yang, L., Stiernborg, M., Soderstrom, A., Ruegg, J. et al. (2020).
Effects of a synbiotic on symptoms, and daily functioning in attention deficit hyperactivity disorder - A double-blind randomized controlled.
Brain, behavior, and immunity, . 89: 9-19 DOI
Spribille, T., Tagirdzhanova, G., Goyette, S., Tuovinen, V., Case, R. et al. (2020).
3D biofilms: in search of the polysaccharides holding together lichen symbioses.
FEMS Microbiology Letters, 367(5) DOI
Sulej, T., Krzesinski, G., Talanda, M., Wolniewicz, A., Blazejowski, B. et al. (2020).
The earliest-known mammaliaform fossil from Greenland sheds light on origin of mammals.
Proceedings of the National Academy of Sciences of the United States of America, 117(43): 26861-26867 DOI
Sulej, T., Niedzwiedzki, G., Talanda, M., Drozdz, D., Hara, E. (2020).
A new early Late Triassic non-mammaliaform eucynodont from Poland.
Historical Biology, . 32(1): 80-92 DOI
Sundman, A., Pértille, F., Lehmann Coutinho, L., Jazin, E., Guerrero-Bosagna, C. et al. (2020).
DNA methylation in canine brains is related to domestication and dog-breed formation.
PLOS ONE, 15(10) DOI
Thulin, M. (2020).
Nya lokaler för åsstarr i Uppland.
Daphne, 31(1): 20-23
Thulin, M. (2020).
Några blad ur ett skolpojksherbarium.
Daphne, 29(2): 2-5
Thulin, M. (2020).
The Genus Boswellia (Burseraceae): The Frankincense Trees.
Download fulltext
Thulin, M., Patzelt, A. (2020).
First record of the genus Pentzia (Asteraceae) in Oman.
Phytotaxa, . 471(1): 90-92 DOI
Tibell, S., Tibell, L., Pang, K., Calabon, M., Jones, G. (2020).
Marine fungi of the Baltic Sea.
Mycology, . 11(3): 195-213 DOI
Tibell, S., Tibell, L., Pang, K., Jones, G. (2020).
A conspectus of the filamentous marine fungi of Sweden.
Botanica Marina, 63(2): 141-153 DOI
Tibuhwa, D., Hussein, J., Ryvarden, L., Sijaona, M., Tibell, S. (2020).
A phylogeny for the plant pathogen Piptoporellus baudonii using a multigene data set.
Mycologia, 112(5): 1017-1025 DOI
Tikhonenkov, D., Strassert, J., Janouskovec, J., Mylnikov, A., Aleoshin, V. et al. (2020).
Predatory colponemids are the sister group to all other alveolates.
Molecular Phylogenetics and Evolution, . 149 DOI
Vaskaninova, V. (2020).
Bone of contention.
Nature Ecology & Evolution, . 4(11): 1447-1448 DOI
Vaskaninova, V., Chen, D., Tafforeau, P., Johanson, Z., Ekrt, B. et al. (2020).
Marginal dentition and multiple dermal jawbones as the ancestral condition of jawed vertebrates.
Science, . 369(6500): 211-+ DOI
Veldman, S., Ju, Y., Otieno, J., Abihudi, S., Posthouwer, C. et al. (2020).
DNA barcoding augments conventional methods for identification of medicinal plant species traded at Tanzanian markets.
Journal of Ethnopharmacology, . 250 DOI
Vicente, M. (2020).
Demographic History and Adaptation in African Populations.
Diss. Download fulltext
Vicente, M., Schlebusch, C. (2020).
African population history: an ancient DNA perspective..
Current Opinion in Genetics and Development, . 62: 8-15 DOI
Vlcek, B. (2020).
Exploring Diversity in the Midbrain Dopamine System with Emphasis on the Ventral Tegmental Area.
Diss. Download fulltext
von der Heyde, B., Emmanouilidou, A., Mazzaferro, E., Vicenzi, S., Höijer, I. et al. (2020).
Translating GWAS-identified loci for cardiac rhythm and rate using an in vivo image- and CRISPR/Cas9-based approach.
Scientific Reports, 10(1) DOI
Wallén-Mackenzie, Å., Dumas, S., Papathanou, M., Martis Thiele, M., Vlcek, B. et al. (2020).
Spatio-molecular domains identified in the mouse subthalamic nucleus and neighboring glutamatergic and GABAergic brain structures.
Communications Biology, 3(1) DOI
Wang, X., Bernhardsson, C., Ingvarsson, P. (2020).
Demography and Natural Selection Have Shaped Genetic Variation in the Widely Distributed Conifer Norway Spruce (Picea abies).
Genome Biology and Evolution, . 12(2): 3803-3817 DOI
Westerberg, Ivar
Deciphering the formation of evolutionary new centromeres in a microchromosome of birds.
Student thesis, 2020
Wilhelmsson, P., Jaenson, T., Olsen, B., Waldenström, J., Lindgren, P. (2020).
Migratory birds as disseminators of ticks and the tick-borne pathogens Borrelia bacteria and tick-borne encephalitis (TBE) virus: a seasonal study at Ottenby Bird Observatory in South-eastern Sweden.
Parasites & Vectors, . 13 DOI
Xiao, L., Chen, X., Yang, X., Sun, J., Geng, J. (2020).
Recent Advances in Polymer-Based Photothermal Materials for Biological Applications.
ACS APPLIED POLYMER MATERIALS, . 2(10): 4273-4288 DOI
Xie, M., Gol'din, P., Herdina, A., Lopez, J., Medvedeva, E. et al. (2020).
Secondary ossification center induces and protects growth plate structure.
eLIFE, . 9 DOI
Xue, T., Xia, C., Lidén, M., Xu, W., Lu, Z. et al. (2020).
Ignored Biodiversity in Acid Soil Islands in Karst Areas, South China: Impatiens longlinensis (Balsaminaceae), a New Critically Endangered Species.
Systematic Botany, 45(4): 891-899 DOI
Yazdi, H., Silva, W., Suh, A. (2020).
Why Do Some Sex Chromosomes Degenerate More Slowly Than Others?: The Odd Case of Ratite Sex Chromosomes.
Genes, 11(10) DOI
Zhang, H., Waldmann, L., Manuel, R., Boije, H., Haitina, T. et al. (2020).
zOPT: an open source optical projection tomography system and methods for rapid 3D zebrafish imaging.
Biomedical Optics Express, . 11(8): 4290-4305 DOI
Zigaite, Z., Qvarnström, M., Bancroft, A., Perez-Huerta, A., Blom, H. et al. (2020).
Trace and rare earth element compositions of Silurian conodonts from the Vesiku Bone Bed: Histological and palaeoenvironmental implications.
Palaeogeography, Palaeoclimatology, Palaeoecology, 549 DOI
Adem, A., Madjid, N., Stiedl, O., Bonito-Oliva, A., Konradsson-Geuken, Å. et al. (2019).
Atypical but not typical antipsychotic drugs ameliorate phencyclidine-induced emotional memory impairments in mice.
European Neuropsychopharmacology, 29(5): 616-628 DOI
Adl, S., Bass, D., Lane, C., Lukes, J., Schoch, C. et al. (2019).
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes.
Journal of Eukaryotic Microbiology, . 66(1): 4-119 DOI
Ahi, E., Brunel, M., Tsakoumis, E., Schmitz, M. (2019).
Transcriptional study of appetite regulating genes in the brain of zebrafish (Danio rerio) with impaired leptin signalling.
Scientific Reports, . 9 DOI
Ahi, E., Richter, F., Lecaudey, L., Sefc, K. (2019).
Gene expression profiling suggests differences in molecular mechanisms of fin elongation between cichlid species.
Scientific Reports, . 9 DOI
Ahi, E., Singh, P., Duenser, A., Gessl, W., Sturmbauer, C. (2019).
Divergence in larval jaw gene expression reflects differential trophic adaptation in haplochromine cichlids prior to foraging.
BMC Evolutionary Biology, . 19 DOI
Ahlberg, P. (2019).
Follow the footprints and mind the gaps: a new look at the origin of tetrapods.
Earth and environmental science transactions of the Royal Society of Edinburgh, . 109(1-2): 115-137 DOI
Anderson, J., Nieuwenhuis, B., Johannesson, H. (2019).
Asexual reproduction and growth rate: independent and plastic lifehistory traits in Neurospora crassa.
The ISME Journal, 13(3): 780-788 DOI
Baeten, L., Bruelheide, H., van der Plas, F., Kambach, S., Ratcliffe, S. et al. (2019).
Identifying the tree species compositions that maximize ecosystem functioning in European forests.
Journal of Applied Ecology, 56(3): 733-744 DOI
Bahram, M., Anslan, S., Hildebrand, F., Bork, P., Tedersoo, L. (2019).
Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment.
Environmental Microbiology Reports, . 11(4): 487-494 DOI
Barcelo, M., Wallin, A., Medina, J., Gil-Ariza, D., Lopez-Casado, G. et al. (2019).
Isolation and culture of strawberry protoplasts and field evaluation of regenerated plants.
Scientia Horticulturae, . 256 DOI
Bass, D., Ward, G., Burki, F. (2019).
Ascetosporea.
Current Biology, . 29(1): R7-R8 DOI
Beznosov, P., Clack, J., Luksevics, E., Ruta, M., Ahlberg, P. (2019).
Morphology of the earliest reconstructable tetrapod Parmastega aelidae.
Nature, . 574(7779): 527-531 DOI
Bharali, P., Das, A., Lidén, M. (2019).
Notes on the alpine flora of Arunachal Pradesh: including several species new to India.
I A.P. Das; Subir Bera (red.) Plant diversity in the Himalaya hotspot region, Dehradun: Bishen Singh Mahendra Pal Singh. 163-194
Bimpisidis, Z., König, N., Stagkourakis, S., Zell, V., Vlcek, B. et al. (2019).
The NeuroD6 Subtype of VTA Neurons Contributes to Psychostimulant Sensitization and Behavioral Reinforcement.
eNeuro, . 6(3) DOI
Bimpisidis, Z., Wallén-Mackenzie, Å. (2019).
Neurocircuitry of Reward and Addiction: Potential Impact of Dopamine-Glutamate Co-release as Future Target in Substance Use Disorder.
Journal of Clinical Medicine, . 8(11) DOI
Bremer, O., Turner, S., Marss, T., Blom, H. (2019).
Silurian vertebrate remains from the Oslo Region, Norway, and their implications for regional biostratigraphy.
Norsk Geologisk Tidsskrift, . 99(1): 129-155 DOI
Clarac, F., Goussard, F., de Buffrenil, V., Sansalone, V. (2019).
The function(s) of bone ornamentation in the crocodylomorph osteoderms: a biomechanical model based on a finite element analysis.
Paleobiology, . 45(1): 182-200 DOI
Clarac, F., Quilhac, A. (2019).
The crocodylian skull and osteoderms: A functional exaptation to ectothermy?.
Zoology (Jena), . 132: 31-40 DOI
Conte, G., Fanti, F., Trevisani, E., Guaschi, P., Barbieri, R. et al. (2019).
Reassessment of a large lamniform shark from the Upper Cretaceous (Santonian) of Italy.
Cretaceous research (Print), 99: 156-168 DOI
Coutinho, A. (2019).
Where our feet have taken us: Examples of human contact, migration, and adaptation as revealed by ancient DNA.
Diss. Download fulltext
Cubas, M., Peyroteo Stjerna, R., Fontanals-Coll, M., Llorente-Rodríguez, L., Lucquin, A. et al. (2019).
Long-term dietary change in Atlantic and Mediterranean Iberia with the introduction of agriculture: a stable isotope perspective.
Archaeological and Anthropological Sciences, 11(8): 3825-3836 DOI
Cárdenas, P., Moore, J. (2019).
First records of Geodia demosponges from the New England seamounts, an opportunity to test the use of DNA mini-barcodes on museum specimens.
Marine Biodiversity, 49(1): 163-174 DOI
Darolti, I., Wright, A., Sandkam, B., Morris, J., Bloch, N. et al. (2019).
Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers.
Proceedings of the National Academy of Sciences of the United States of America, . 116(38): 19031-19036 DOI
Debiais-Thibaud, M., Simion, P., Venteo, S., Munoz, D., Marcellini, S. et al. (2019).
Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates.
Molecular biology and evolution, 36(10): 2265-2276 DOI
Defourny, J., Peuckert, C., Kullander, K., Malgrange, B. (2019).
EphA4-ADAM10 Interplay Patterns the Cochlear Sensory Epithelium through Local Disruption of Adherens Junctions.
iScience, 11: 246-257 DOI
Den Boer, W., Campione, N., Kear, B. (2019).
Climbing adaptations, locomotory disparity and ecological convergence in ancient stem 'kangaroos'.
Royal Society Open Science, 6(2) DOI
Dhillon, S., Torell, F., Donten, M., Lundstedt-Enkel, K., Bennett, K. et al. (2019).
Metabolic profiling of zebrafish embryo development from blastula period to early larval stages.
PLOS ONE, 14(5) DOI
Dumas, S., Wallén-Mackenzie, Å. (2019).
Developmental Co-expression of Vglut2 and Nurr1 in a Mes-Di-Encephalic Continuum Preceeds Dopamine and Glutamate Neuron Specification.
Frontiers in Cell and Developmental Biology, . 7 DOI
Elgh, E., Pienkowski, G., Niedzwiedzki, G. (2019).
Pterosaur track assemblages from the Upper Jurassic (lower Kimmeridgian) intertidal deposits of Poland: Linking ichnites to potential trackmakers.
Palaeogeography, Palaeoclimatology, Palaeoecology, . 530: 32-48 DOI
Elmhalli, F. (2019).
Plants as Sources of Natural and Effective Acaricides: Against Ixodes ricinus (Acari: Ixodidae).
Diss. Download fulltext