Our publications

  • Burki, Fabien; Roger, Andrew J.; Brown, Matthew W.; Simpson, Alastair G. B.

    The New Tree of Eukaryotes

    Part of Trends in Ecology & Evolution, p. 43-55, 2020.

    Open access
  • Carlsson, Bengt; Svensson, Brita; Ljungstrand, Erik; Lindell, Torbjörn et al.

    Det är fjädersvingel som växer på Gotlands sandstränder [Vulpia fasciculata found on sandy beaches on Gotland, SE Sweden]

    Part of Svensk Botanisk Tidskrift, p. 4-8, 2020.

  • Veldman, Sarina; Ju, Yingzi; Otieno, Joseph N.; Abihudi, Siri et al.

    DNA barcoding augments conventional methods for identification of medicinal plant species traded at Tanzanian markets

    Part of Journal of Ethnopharmacology, 2020.

    Open access
  • Irisarri, Iker; Uribe, Juan E.; Eernisse, Douglas J.; Zardoya, Rafael

    A mitogenomic phylogeny of chitons (Mollusca: Polyplacophora)

    Part of BMC Evolutionary Biology, 2020.

    Open access
  • Tibell, Sanja; Tibell, Leif; Pang, Ka-Lai; Calabon, Mark et al.

    Marine fungi of the Baltic Sea

    Part of Mycology - An International Journal on Fungal Biology, 2020.

    Open access
  • Ge, Zai-Wei; Wu, Jian-Yun; Hao, Yan-Jia; Zhang, Qingying et al.

    The genus Catathelasma (Catathelasmataceae, Basidiomycota) in China

    Part of MycoKeys, p. 123-138, 2020.

    Open access
  • Jamy, Mahwash; Foster, Rachel; Barbera, Pierre; Czech, Lucas et al.

    Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity

    Part of Molecular Ecology Resources, p. 429-443, 2020.

  • Bell, David; Lin, Qianshi; Gerelle, Weslery K.; Joya, Steve et al.

    Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution

    Part of American Journal of Botany, p. 91-115, 2020.

  • Samarasinghe, Himeshi; Vogan, Aaron; Pum, Nicole; Xu, Jianping

    Patterns of allele distribution in a hybrid population of the Cryptococcus neoformans species complex

    Part of Mycoses (Berlin), p. 275-283, 2020.

  • Tibell, Sanja; Tibell, Leif; Pang, Ka-Lai; Jones, Gareth E.B.

    A conspectus of the filamentous marine fungi of Sweden

    Part of Botanica Marina, p. 141-153, 2020.

    Open access
  • Jones, Gareth; Devadatha, Bandarupalli; Abdel-Wahab, Mohamed; Dayarathne, Monika et al.

    Phylogeny of new marine Dothideomycetes and Sordariomycetes from mangroves and deep-sea sediments

    Part of Botanica Marina, p. 155-181, 2020.

    Open access
  • Grandi, Giulio; Chitimia-Dobler, Lidia; Choklikitumnuey, Phimphanit; Strube, Christina et al.

    First records of adult Hyalomma marginatum and H. rufipes ticks (Acari: Ixodidae) in Sweden

    Part of Ticks and Tick-borne Diseases, 2020.

  • Hussein, Juma Mahmud

    Polyporoid fungi of Tanzania: Taxonomy, transcriptomics and biochemical analyses of Kusaghiporia usambarensis and Piptoporellus baudonii

    Open access
  • Frohlich, Michael W.; Thulin, Mats; Chase, Mark W.

    Ninety-three new combinations in Euploca for species of Heliotropium section Orthostachys (Boraginaceae sensu APG)

    Part of Phytotaxa, p. 13-21, 2020.

    Open access
  • Ament-Velásquez, Sandra Lorena

    Drivers of evolutionary change in Podospora anserina

    Open access
  • Thulin, Mats

    The Genus Boswellia (Burseraceae): The Frankincense Trees

    Acta Universitatis Upsaliensis, 2020.

    Open access
  • Lidén, Magnus; Bharali, Pankaj

    Flowers of the Se La: Alpine plants of NW Arunachal Pradesh

    Uppsala University, 2020.

    Open access
  • Hosseini, Sara; Meunier, Cécile; Nguyen, Diem; Reimegård, Johan et al.

    Comparative analysis of genome-wide DNA methylation in Neurospora

    Part of Epigenetics, 2020.

    Open access
  • Ling, Jiaxin; Vinnersten, Thomas Persson; Hesson, Jenny C.; Bohlin, Jon et al.

    Identification of hepatitis C virus in the common bed bug - a potential, but uncommon route for HCV infection?

    Part of EMERGING MICROBES & INFECTIONS, p. 1429-1431, 2020.

    Open access
  • Tibuhwa, Donatha; Hussein, Juma; Ryvarden, Leif; Mark, Sijaona et al.

    A phylogeny for the plant pathogen Piptoporellus baudonii using a multigene data set

    Part of Mycologia, 2020.

  • Irwin, Nicholas; Tikhonenkov, Denis; Hehenberger, Elisabeth; Mylnikov, Alexander et al.

    Phylogenomics supports the monophyly of the Cercozoa

    Part of Molecular Phylogenetics and Evolution, p. 416-423, 2019.

  • Bass, David; Ward, Georgia M.; Burki, Fabien


    Part of Current Biology, p. R7-R8, 2019.

  • Adl, Sina M.; Bass, David; Lane, Christopher E.; Lukes, Julius et al.

    Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes

    Part of Journal of Eukaryotic Microbiology, p. 4-119, 2019.

    Open access
  • Cárdenas, Paco; Moore, Jon A.

    First records of Geodia demosponges from the New England seamounts, an opportunity to test the use of DNA mini-barcodes on museum specimens

    Part of Marine Biodiversity, p. 163-174, 2019.

    Open access
  • Tuovinen, Veera; Ekman, Stefan; Thor, Goren; Vanderpool, Dan et al.

    Two Basidiomycete Fungi in the Cortex of Wolf

    Part of Current Biology, p. 476-+, 2019.

    Open access
  • Uribe, Juan E.; Irisarri, Iker; Templado, Jose; Zardoya, Rafael

    New patellogastropod mitogenomes help counteracting long-branch attraction in the deep phylogeny of gastropod mollusks

    Part of Molecular Phylogenetics and Evolution, p. 12-23, 2019.

  • Baeten, Lander; Bruelheide, Helge; van der Plas, Fons; Kambach, Stephan et al.

    Identifying the tree species compositions that maximize ecosystem functioning in European forests

    Part of Journal of Applied Ecology, p. 733-744, 2019.

  • Thulin, Mats; Decarlo, Anjanette; Johnson, Stephen P.

    Boswellia occulta (Burseraceae), a new species of frankincense tree from Somalia (Somaliland)

    Part of Phytotaxa, p. 219-224, 2019.

    Open access
  • Rhoades, Nicholas A.; Harvey, Austin M.; Samarajeewa, Dilini A.; Svedberg, Jesper et al.

    Identification of rfk-1, a Meiotic Driver Undergoing RNA Editing in Neurospora

    Part of Genetics, p. 93-110, 2019.

  • Tibell, Leif; Tibell Savić, Sanja; Van Der Pluijm, Arno

    Chaenotheca biesboschii a new calicioid lichen from willow forests in the Netherlands

    Part of The Lichenologist, p. 123-135, 2019.

  • Elmhalli, Fawzeia

    Plants as Sources of Natural and Effective Acaricides: Against Ixodes ricinus  (Acari: Ixodidae)

    Open access
  • Ferm, Julia

    A preliminary phylogeny of Zapoteca (Fabaceae: Caesalpinioideae: Mimosoid clade)

    Part of Plant Systematics and Evolution, p. 341-352, 2019.

    Open access
  • Hua, Wenjing; Vogan, Aaron A.; Xu, Jianping

    Genotypic and Phenotypic Analyses of Two "Isogenic" Strains of the Human Fungal Pathogen Cryptococcus neoformans var. neoformans

    Part of Mycopathologia, p. 195-212, 2019.

  • Hilonga, S.; Otieno, J. N.; Ghorbani, Abdolbaset; Pereus, D. et al.

    Trade of wild-harvested medicinal plant species in local markets of Tanzania and its implications for conservation

    Part of South African Journal of Botany, p. 214-224, 2019.

  • Pereus, D.; Otieno, J. N.; Ghorbani, Abdolbaset; Kocyan, A. et al.

    Diversity of Hypoxis species used in ethnomedicine in Tanzania

    Part of South African Journal of Botany, p. 336-341, 2019.

  • Anderson, Jennifer L; Nieuwenhuis, Bart P. S.; Johannesson, Hanna

    Asexual reproduction and growth rate: independent and plastic lifehistory traits in Neurospora crassa

    Part of The ISME Journal, p. 780-788, 2019.

    Open access
  • Hosken, David J.; Archer, C. Ruth; Mank, Judith E.

    Sexual conflict

    Part of Current Biology, p. R451-R455, 2019.

  • Bahram, Mohammad; Anslan, Sten; Hildebrand, Falk; Bork, Peer et al.

    Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment

    Part of Environmental Microbiology Reports, p. 487-494, 2019.

    Open access
  • Svahn, Tony M.; Sjöberg, Tommy; Ast, Jennifer C.

    Dose estimation of ultra-low-dose chest CT to different sized adult patients

    Part of European Radiology, p. 4315-4323, 2019.

  • Wright, Alison E.; Rogers, Thea F.; Fumagalli, Matteo; Cooney, Christopher R. et al.

    Phenotypic sexual dimorphism is associated with genomic signatures of resolved sexual conflict

    Part of Molecular Ecology, p. 2860-2871, 2019.

    Open access
  • Temu, Stella; Clerc, Philippe; Tibell, Leif; Tibuhwa, Donatha et al.

    Phylogeny of the subgenus Eumitria in Tanzania

    Part of Mycology: An International Journal on Fungal Biology, 2019.

    Open access
  • Strassert, Jürgen F. H.; Hehenberger, Elisabeth; del Campo, Javier; Okamoto, Noriko et al.

    Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods

    Part of Journal of Eukaryotic Microbiology, p. 574-581, 2019.

  • Thulin, Mats; Harley, Raymond M.

    Mollugo viscosa sp. nov. (Molluginaceae), a segregate of M. brasiliensis from Minas Gerais in eastern Brazil

    Part of Nordic Journal of Botany, 2019.

  • Elmhalli, Fawzeia; Garboui, Samira S.; Karlson, Anna Karin M. Borg; Mozuraitis, Raimondas et al.

    The repellency and toxicity effects of Essential oils from the Libyan plants Salvadora persica and Rosmarinus officinalis against nymphs of Ixodes ricinus.

    Part of Experimental & applied acarology, p. 585-599, 2019.

    Open access
  • Strassert, Jürgen F. H.; Jamy, Mahwash; Mylnikov, Alexander P.; Tikhonenkov, Denis V. et al.

    New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life

    Part of Molecular biology and evolution, p. 757-765, 2019.

  • Waege, J.; Strassert, Jürgen F. H.; Landsberger, A.; Loick-Wilde, N. et al.

    Microcapillary sampling of Baltic Sea copepod gut microbiomes indicates high variability among individuals and the potential for methane production

    Part of FEMS Microbiology Ecology, 2019.

  • Keeling, Patrick J.; Burki, Fabien

    Progress towards the Tree of Eukaryotes

    Part of Current Biology, p. R808-R817, 2019.

  • Garcia-Porta, Joan; Irisarri, Iker; Kirchner, Martin; Rodriguez, Ariel et al.

    Environmental temperatures shape thermal physiology as well as diversification and genome-wide substitution rates in lizards

    Part of Nature Communications, 2019.

    Open access
  • Darolti, Iulia; Wright, Alison E.; Sandkam, Benjamin A.; Morris, Jake et al.

    Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers

    Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19031-19036, 2019.

    Open access
  • Hiltunen, Markus; Grudzinska-Sterno, Magdalena; Wallerman, Ola; Ryberg, Martin et al.

    Maintenance of High Genome Integrity over Vegetative Growth in the Fairy-Ring Mushroom Marasmius oreades

    Part of Current Biology, p. 2758-2765, 2019.

  • Bharali, Pankaj; Das, Arup Kumar; Lidén, Magnus

    Notes on the alpine flora of Arunachal Pradesh: including several species new to India

    Part of Plant diversity in the Himalaya hotspot region, p. 163-194, 2019.

  • Lidén, Magnus

    Silene indica (Caryophyllaceae) is not an Indian species

    Part of Angiosperm Systematics:, p. 98-106, 2019.

  • Leebens-Mack, James H.; Barker, Michael S.; Carpenter, Eric J.; Deyholos, Michael K. et al.

    One thousand plant transcriptomes and the phylogenomics of green plants

    Part of Nature, p. 679-+, 2019.

    Open access
  • Jaenson, Thomas G.T.; Wilhelmsson, Peter

    First records of tick-borne pathogens in populations of the taiga tick Ixodes persulcatus in Sweden

    Part of Parasites & Vectors, 2019.

    Open access
  • Kinsella, Cormac M.; Ruiz-Ruano, Francisco J.; Dion-Cote, Anne-Marie; Charles, Alexander J. et al.

    Programmed DNA elimination of germline development genes in songbirds

    Part of Nature Communications, 2019.

    Open access
  • Symonova, Radka; Suh, Alexander

    Nucleotide composition of transposable elements likely contributes to AT/GC compositional homogeneity of teleost fish genomes

    Part of Mobile DNA, 2019.

    Open access
  • Thulin, Mats

    Luddranunkel och grekvädd funna på Gotland

    Part of Rindi, p. 14-17, 2019.

  • Lidén, Magnus; Adhikari, Alister

    Floristic report from Upper Dibang (Arunachal Pradesh) with several species new to India

    Part of Pleione, p. 175-187, 2019.

  • Lidén, Magnus

    Vad skall växten heta? Om reglerna kring den botaniska namngivningen

    Part of Svensk Botanisk Tidskrift, p. 88-97, 2019.

  • Lidén, Magnus

    Platanthera species with amphora-like spurs in NE India

    Part of Pleione, p. 171-174, 2019.

  • Lidén, Magnus

    On the identity of Balanophora involucrata Hook.f. and B. flava (Hook.f.) Lidén comb. nov.

    Part of Pleione, p. 139-141, 2019.

  • Gilbert Temu, Stella; Tibell, Sanja; Tibuhwa, Donatha; Tibell, Leif

    Crustose Calicioid Lichens and Fungi in Mountain Cloud Forests of Tanzania

    Part of Microorganisms, 2019.

    Open access
  • Ferm, Julia; Korall, Petra; Lewis, Gwilym P; Ståhl, Bertil

    Phylogeny of the Neotropical legume genera Zygia and Marmaroxylon and close relatives

    Part of Taxon, 2019.

  • Vogan, Aaron A.; Ament-Velásquez, Sandra Lorena; Granger-Farbos, Alexandra; Svedberg, Jesper et al.

    Combinations of Spok genes create multiple meiotic drivers in Podospora

    Part of eLIFE, 2019.

    Open access
  • Strassert, Jürgen F H; Karnkowska, Anna; Hehenberger, Elisabeth; del Campo, Javier et al.

    Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates

    Part of The ISME Journal, p. 304-308, 2018.

  • Anslan, Sten; Bahram, Mohammad; Tedersoo, Leho

    Seasonal and annual variation in fungal communities associated with epigeic springtails (Collembola spp.) in boreal forests

    Part of Soil Biology and Biochemistry, p. 245-252, 2018.

  • Radek, Renate; Meuser, Katja; Strassert, Jürgen F. H.; Arslan, Oguzhan et al.

    Exclusive Gut Flagellates of Serritermitidae Suggest a Major Transfaunation Event in Lower Termites: Description of Heliconympha glossotermitis gen. nov spec. nov.

    Part of Journal of Eukaryotic Microbiology, p. 77-92, 2018.

  • Montesinos-Tubee, Daniel B.; Cano, Asuncion; Garcia-Llatas, Luis F.; Ju, Yingzi et al.

    Paronychia sanchez-vegae (Caryophyllaceae), a new woody species of Paronychia from North Peru

    Part of Phytotaxa, p. 41-48, 2018.

  • Weckerle, Caroline S.; de Boer, Hugo J.; Puri, Rajindra K.; van Andel, Tinde et al.

    Recommended standards for conducting and reporting ethnopharmacological field studies

    Part of Journal of Ethnopharmacology, p. 125-132, 2018.

  • Pölme, Sergei; Bahram, Mohammad; Jacquemyn, Hans; Kennedy, Peter et al.

    Host preference and network properties in biotrophic plant-fungal associations

    Part of New Phytologist, p. 1230-1239, 2018.

  • Vowles, Tage; Lindwall, Frida; Ekblad, Alf; Bahram, Mohammad et al.

    Complex effects of mammalian grazing on extramatrical mycelial biomass in the Scandes forest-tundra ecotone

    Part of Ecology and Evolution, p. 1019-1030, 2018.

    Open access
  • Sanyal, Anushree; Lenoir, Jonathan; O'Neill, Carmel; Dubois, Frederic et al.

    Intraspecific and interspecific adaptive latitudinal cline in Brassicaceae seed oil traits

    Part of American Journal of Botany, p. 85-94, 2018.

  • Ryberg, Martin; Nilsson, R. Henrik

    New light on names and naming of dark taxa

    Part of MycoKeys, p. 31-39, 2018.

    Open access
  • Lidén, Magnus; Kårehed, Jesper

    Linné och det naturliga systemet

    Part of Svensk Botanisk Tidskrift, p. 68-80, 2018.

  • Meunier, Cécile; Hosseini, Sara; Heidari, Nahid; Maryush, Zaywa et al.

    Multilevel Selection in the Filamentous Ascomycete Neurospora tetrasperma

    Part of American Naturalist, p. 290-305, 2018.

    Open access
  • Wanasinghe, Dhanushka N.; Phukhamsakda, Chayanard; Hyde, Kevin D.; Jeewon, Rajesh et al.

    Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae

    Part of Fungal diversity, p. 1-236, 2018.

  • Tahir, Aisha; Hussain, Fatma; Ahmed, Nisar; Ghorbani, Abdolbaset et al.

    Assessing universality of DNA barcoding in geographically isolated selected desert medicinal species of Fabaceae and Poaceae

    Part of PeerJ, 2018.

    Open access
  • de Boer, Hugo; Newman, Mark; Poulsen, Axel Dalberg; Droop, A. Jane et al.

    Convergent morphology in Alpinieae (Zingiberaceae): Recircumscribing Amomum as a monophyletic genus

    Part of Taxon, p. 6-36, 2018.

  • Onuţ-Brännström, Ioana; Benjamin, Mitchell; Scofield, Douglas G.; Starri, Heiðmarsson et al.

    Sharing of photobionts in sympatric populations of Thamnolia and Cetraria lichens: evidence from high-throughput sequencing

    Part of Scientific Reports, 2018.

    Open access
  • Bahram, Mohammad; Vanderpool, Dan; Pent, Mari; Hiltunen, Markus et al.

    The genome and microbiome of a dikaryotic fungus (Inocybe terrigena, Inocybaceae) revealed by metagenomics

    Part of Environmental Microbiology Reports, p. 155-166, 2018.

  • Darolti, Iulia; Wright, Alison E.; Pucholt, Pascal; Berlin, Sofia et al.

    Slow evolution of sex-biased genes in the reproductive tissue of the dioecious plant Salix viminalis

    Part of Molecular Ecology, p. 694-708, 2018.

    Open access
  • Hinsley, Amy; de Boer, Hugo J.; Fay, Michael F.; Gale, Stephan W. et al.

    A review of the trade in orchids and its implications for conservation

    Part of Botanical journal of the Linnean Society, p. 435-455, 2018.

  • Sundberg, Henrik; Ekman, Stefan; Kruys, Åsa

    A crush on small fungi: An efficient and quick method for obtaining DNA from minute ascomycetes

    Part of Methods in Ecology and Evolution, p. 148-158, 2018.

  • Sundberg, Henrik; Kruys, Åsa; Bergsten, Johannes; Ekman, Stefan

    Position specificity in the genus Coreomyces (Laboulbeniomycetes, Ascomycota)

    Part of Fungal Systematics and Evolution, p. 217 217-228 228, 2018.

    Open access
  • Zhang, Zebin; Jia, Yaxiong; Almeida, Pedro; Mank, Judith E. et al.

    Whole-genome resequencing reveals signatures of selection and timing of duck domestication

    Part of GigaScience, 2018.

    Open access
  • Mirmajlessi, S. M.; Bahram, Mohammad; Mänd, M.; Najdabbasi, N. et al.

    Survey of Soil Fungal Communities in Strawberry Fields by Illumina Amplicon Sequencing

    Part of Eurasian Soil Science, p. 682-691, 2018.

  • Posthouwer, Chantal; Veldman, Sarina; Abihudi, Sarina; Otieno, Joseph N. et al.

    Quantitative market survey of non-woody plants sold at Kariakoo Market in Dar es Salaam, Tanzania

    Part of Journal of Ethnopharmacology, p. 280-287, 2018.

  • Ghorbani, Abdolbaset; Wieringa, Jan J.; de Boer, Hugo J.; Porck, Henk et al.

    Botanical and floristic composition of the Historical Herbarium of Leonhard Rauwolf collected in the Near East (1573-1575)

    Part of Taxon, p. 565-580, 2018.

  • Tedersoo, Leho; Sanchez-Ramirez, Santiago; Koljalg, Urmas; Bahram, Mohammad et al.

    High-level classification of the Fungi and a tool for evolutionary ecological analyses

    Part of Fungal diversity, p. 135-159, 2018.

    Open access
  • Morris, Jake; Darolti, Iulia; Bloch, Natasha I.; Wright, Alison E. et al.

    Shared and Species-Specific Patterns of Nascent Y Chromosome Evolution in Two Guppy Species

    Part of Genes, 2018.

    Open access
  • Zlatogursky, Vasily V.; Drachko, Daria; Klimov, Vladimir, I; Shishkin, Yegor

    On the phylogenetic position of the genus Raphidocystis (Haptista: Centroplasthelida) with notes on the dimorphism in centrohelid life cycle

    Part of European Journal of Protistology, p. 82-90, 2018.

  • Sundberg, Henrik

    Contributions to the understanding of diversity and evolution in the genus Coreomyces

    Open access
  • Anslan, Sten; Nilsson, R. Henrik; Wurzbacher, Christian; Baldrian, Petr et al.

    Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding

    Part of MycoKeys, p. 29-40, 2018.

    Open access
  • Jaenson, Thomas G.T.; Petersson, Erik H.; Jaenson, David G. E.; Kindberg, Jonas et al.

    The importance of wildlife in the ecology and epidemiology of the TBE virus in Sweden: incidence of human TBE correlates with abundance of deer and hares

    Part of Parasites & Vectors, 2018.

    Open access
  • Bahram, Mohammad; Hildebrand, Falk; Forslund, Sofia K; Anderson, Jennifer L et al.

    Structure and function of the global topsoil microbiome.

    Part of Nature, p. 233-237, 2018.

  • Shishkin, Yegor; Drachko, Daria; Klimov, Vladimir, I; Zlatogursky, Vasily V.

    Yogsothoth knorrus gen. n., sp n. and Y. carteri sp n. (Yogsothothidae fam. n., Haptista, Centroplasthelida), with Notes on Evolution and Systematics of Centrohelids

    Part of Protist, p. 682-696, 2018.

  • Pent, Mari; Hiltunen, Markus; Poldmaa, Kadri; Furneaux, Brendan R. et al.

    Host genetic variation strongly influences the microbiome structure and function in fungal fruiting-bodies

    Part of Environmental Microbiology, p. 1641-1650, 2018.

  • Svedberg, Jesper; Hosseini, Sara; Chen, Jun; Vogan, Aaron A. et al.

    Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements

    Part of Nature Communications, 2018.

    Open access
  • Pennell, Matthew W.; Mank, Judith E.; Peichel, Catherine L.

    Transitions in sex determination and sex chromosomes across vertebrate species

    Part of Molecular Ecology, p. 3950-3963, 2018.

  • Wright, Alison E.; Fumagalli, Matteo; Cooney, Christopher R.; Bloch, Natasha, I et al.

    Male-biased gene expression resolves sexual conflict through the evolution of sex-specific genetic architecture

    Part of EVOLUTION LETTERS, p. 52 52-61 61, 2018.

    Open access
  • Farida, Seyed Hamed Moazzami; Ghorbani, Abdolbaset; Ajani, Yousef; Sadr, Mohammad et al.

    Ethnobotanical Applications and Their Correspondence with Phylogeny in Apiaceae-Apioideae

    Part of RESEARCH JOURNAL OF PHARMACOGNOSY, p. 79 79-97 97, 2018.

    Open access
  • Hoffman, Tove; Lindeborg, Mats; Barboutis, Christos; Erciyas-Yavuz, Kiraz et al.

    Alkhurma Hemorrhagic Fever Virus RNA in Hyalomma rufipes Ticks Infesting Migratory Birds, Europe and Asia Minor

    Part of Emerging Infectious Diseases, p. 879-882, 2018.

  • Crous, P. W.; Luangsa-ard, J. J.; Wingfield, M. J.; Carnegie, A. J. et al.

    Fungal Planet description sheets: 785-867

    Part of Persoonia, p. 238-417, 2018.

  • Deng, Pan; Fu, Cheng-Jie; Wu, Zhigang

    High purity and viability cell separation of a bacterivorous jakobid flagellate based on a steep velocity gradient induced soft inertial force

    Part of RSC Advances, p. 35512-35520, 2018.

    Open access
  • Veldman, Sarina; Kim, Seol-Jong; van Andel, Tinde R.; Font, Maria Bello et al.

    Trade in Zambian Edible Orchids-DNA Barcoding Reveals the Use of Unexpected Orchid Taxa for Chikanda

    Part of Genes, 2018.

    Open access
  • Bloch, Natasha, I; Corral-Lopez, Alberto; Buechel, Severine D.; Kotrschal, Alexander et al.

    Early neurogenomic response associated with variation in guppy female mate preference

    Part of Nature Ecology & Evolution, p. 1772-1781, 2018.

  • Badou, Sylvestre A.; De Kesel, Andre; Raspe, Olivier; Ryberg, Martin et al.

    Two new African siblings of Pulveroboletus ravenelii (Boletaceae)

    Part of MycoKeys, p. 115-130, 2018.

    Open access
  • Whelan, Simon; Irisarri, Iker; Burki, Fabien

    PREQUAL: detecting non-homologous characters in sets of unaligned homologous sequences

    Part of Bioinformatics, p. 3929-3930, 2018.

  • Elmhalli, Fawzeia; Palsson, Katinka; Örberg, Jan; Grandi, Giulio

    Acaricidal properties of ylang-ylang oil and star anise oil against nymphs of Ixodes ricinus (Acari: Ixodidae)

    Part of Experimental & applied acarology, p. 209-220, 2018.

    Open access
  • Lidén, Magnus

    Silene pseudoindica(Caryophyllaceae) a new species from Nepal, hitherto confused withS. indica

    Part of Angiosperm Systematics:, p. 91-97, 2018.

  • Lidén, Magnus

    Notes on Corydalis DC. (Papaveraceae) in Eastern Himalaya with one species new to India

    Part of Plant diversity in the Himalaya hotspot region., p. 253-256, 2018.

  • Lang, Daniel; Ullrich, Kristian K.; Murat, Florent; Fuchs, Joerg et al.

    The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution

    Part of The Plant Journal, p. 515-533, 2018.

  • Thulin, Mats; Larsson, Anders; Edwards, Erika J.; Moore, Abigail J.

    Phylogeny and Systematics of Kewa (Kewaceae)

    Part of Systematic Botany, p. 689-700, 2018.

  • Thulin, Mats; Heidari, Nahid; Larsson, Anders

    Cucumis omissus sp nov (Cucurbitaceae) from southern Arabia and Ethiopia and its phylogenetic position

    Part of Nordic Journal of Botany, 2018.

  • Thulin, Mats

    En ny lokal för gotlandsranunkel upptäckt i Ardre

    Part of Rindi: tidskrift för gotländsk botanik, p. 47 47-49 49, 2018.

  • Saitta, Alessandro; Anslan, Sten; Bahram, Mohammad; Brocca, Luca et al.

    Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem

    Part of Mycorrhiza, p. 39-47, 2018.

  • Brännström, Ioana Onut; Johannesson, Hanna; Tibell, Leif

    Thamnolia tundrae sp nov., a cryptic species and putative glacial relict

    Part of The Lichenologist, p. 59-75, 2018.

  • Cavender, James C.; Vadell, Eduardo; Landolt, John C.; Stephenson, Steven L. et al.

    New dictyostelid cellular slime molds from South Africa

    Part of Phytotaxa, p. 233-251, 2018.

  • Baldauf, Sandra L.; Romeralo, Maria; Fiz-Palacios, Omar; Heidari, Nahid

    A Deep Hidden Diversity of Dictyostelia

    Part of Protist, p. 64-78, 2018.

  • Sheikh, Sanea; Thulin, Mats; Cavender, James C.; Escalante, Ricardo et al.

    A New Classification of the Dictyostelids

    Part of Protist, p. 1-28, 2018.

  • Urbina, Hector; Breed, Martin F.; Zhao, Weizhou; Gurrala, Kanaka Lakshmi et al.

    Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere

    Part of Fungal Biology, p. 231-240, 2018.

  • Onsbring, Henning; Jamy, Mahwash; Ettema, Thijs J. G.

    RNA Sequencing of Stentor Cell Fragments Reveals Transcriptional Changes during Cellular Regeneration

    Part of Current Biology, p. 1281-1288.e3, 2018.

  • Hussein, Juma; Tibuhwa, Donatha Damian; Tibell, Sanja

    Phylogenetic position and taxonomy of Kusaghiporia usambarensis gen. et sp. nov. (Polyporales)

    Part of Mycology, 2018.

    Open access
  • Thulin, Mats

    Lectotypification of Paramollugo nudicaulis (Molluginaceae)

    Part of Candollea, p. 31-34, 2017.

  • Liu, Jian-Kui; Hyde, Kevin D.; Jeewon, Rajesh; Phillips, Alan J. L. et al.

    Ranking higher taxa using divergence times: a case study in Dothideomycetes

    Part of Fungal diversity, p. 75-99, 2017.

  • Svedberg, Jesper

    Catching the Spore killers: Genomic conflict and genome evolution in Neurospora

    Open access
  • Schwallier, Rachel; Gravendeel, Barbara; de Boer, Hugo; Nylinder, Stephan et al.

    Evolution of wood anatomical characters in Nepenthes and close relatives of Caryophyllales

    Part of Annals of Botany, p. 1179-1193, 2017.

  • Morrison, David A.

    Phylogenetic analysis of pathogens

    Part of Genetics and Evolution of Infectious Diseases, p. 167-193, 2017.

  • Morrison, David A.

    Next Generation Systematics

    Part of Systematic Biology, ISSN 1063-5157, EISSN 1076-836X, p. 121 121-123 123, 2017.

  • Nilsson, R. Henrik; Sánchez-García, Marisol; Ryberg, Martin; Abarenkov, Kessy et al.

    Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory

    Part of MycoKeys, p. 13-24, 2017.

    Open access
  • Burki, Fabien

    A new Lineage of Eukaryotes Illuminates Eraly Mitochondrial Genome Reduction

    Part of Current Biology, 2017.

  • Ståhl, Bertil; Persson, Claes

    Simira colorata (Rubiaceae), a new species from western Ecuador

    Part of Phytotaxa, p. 283-287, 2017.

  • Lidén, Magnus; Bharali, Pankaj

    Impatiens pyrorhiza sp. nov. (Balsaminaceae) from east Himalaya

    Part of Nordic Journal of Botany, p. 411-416, 2017.

  • Kool, Anneleen; Thulin, Mats

    A giant spurrey on a tiny island: On the phylogenetic position of Sanctambrosia manicata (Caryophyllaceae) and the generic circumscriptions of Spergula, Spergularia and Rhodalsine

    Part of Taxon, p. 615-622, 2017.

  • Asghar, Naveed; Pettersson, John H.-O.; Dinnetz, Patrik; Andreassen, Ashild et al.

    Deep sequencing analysis of tick-borne encephalitis virus from questing ticks at natural foci reveals similarities between quasispecies pools of the virus

    Part of Journal of General Virology, p. 413-421, 2017.

    Open access
  • Dirks-Mulder, Anita; Butot, Roland; van Schaik, Peter; Wijnands, Jan Willem P. M. et al.

    Exploring the evolutionary origin of floral organs of Erycina pusilla, an emerging orchid model system

    Part of BMC Evolutionary Biology, 2017.

    Open access
  • Sher, Hassan; Barkworth, Mary E.; de Boer, Hugo J.

    Medicinal and aromatic plant cultivation in the Swat valley, north-western Pakistan, for economic development and biodiversity conservation

    Part of Genetic Resources and Crop Evolution, p. 237-245, 2017.

  • Ghorbani, Abdolbaset; Saeedi, Yousef; de Boer, Hugo J.

    Unidentifiable by morphology: DNA barcoding of plant material in local markets in Iran

    Part of PLoS ONE, 2017.

    Open access
  • Sun, Yu; Svedberg, Jesper; Hiltunen, Markus; Corcoran, Pádraic et al.

    Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma

    Part of Nature Communications, 2017.

  • Pent, Mari; Poldmaa, Kadri; Bahram, Mohammad

    Bacterial Communities in Boreal Forest Mushrooms Are Shaped Both by Soil Parameters and Host Identity

    Part of Frontiers in Microbiology, 2017.

    Open access
  • Tedersoo, Leho; Bahram, Mohammad; Puusepp, Rasmus; Nilsson, R. Henrik et al.

    Novel soil-inhabiting clades fill gaps in the fungal tree of life

    Part of Microbiome, 2017.

    Open access
  • Nguyen, Diem; Boberg, Johanna; Cleary, Michelle; Bruelheide, Helge et al.

    Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods

    Part of Scientific Reports, 2017.

    Open access
  • Onuț-Brännström, Ioana

    The puzzle of lichen symbiosis: Pieces from Thamnolia

    Open access
  • Podani, Janos; Morrison, David A.

    Categorizing ideas about systematics: alternative trees of trees, and related representations

    Part of Rendiconti Lincei SCIENZE FISICHE E NATURALI, p. 191-202, 2017.

  • Sheikh, Sanea

    Genomics of Sorocarpic Amoebae

    Open access
  • Ghorbani, Abdolbaset; Gravendeel, Barbara; Selliah, Sugirthini; Zarré, Shahin et al.

    DNA barcoding of tuberous Orchidoideae: a resource for identification of orchids used in Salep

    Part of Molecular Ecology Resources, p. 342-352, 2017.

  • Janouškovec, Jan; Gavelis, Gregory S; Burki, Fabien; Dinh, Donna et al.

    Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics

    Part of Proceedings of the National Academy of Sciences of the United States of America, p. E171-E180, 2017.

  • Pteridophyte Phylogeny Group, The; Schuettpelz, Eric; Schneider, Harald; Smith, Alan R et al.

    A community-derived classification for extant lycophytes and ferns

    Part of Journal of Systematics and Evolution, p. 563-603, 2017.

  • Hiiesalu, Indrek; Bahram, Mohammad; Tedersoo, Leho

    Plant species richness and productivity determine the diversity of soil fungal guilds in temperate coniferous forest and bog habitats

    Part of Molecular Ecology, p. 4846-4858, 2017.

  • de Boer, Hugo J.; Ghorbani, Abdolbaset; Manzanilla, Vincent; Raclariu, Ancuta-Cristina et al.

    DNA metabarcoding of orchid-derived products reveals widespread illegal orchid trade

    Part of Proceedings of the Royal Society of London. Biological Sciences, 2017.